Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS05405 | Not Available | Positive | 1330542 - 1332121 | 58506.3 |
| histidine phosphatase family protein | BvMPK_RS05410 | Not Available | Positive | 1332524 - 1333042 | 19475.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05415 | Not Available | Negative | 1333065 - 1336321 | 120347.0 |
| glycoside hydrolase n-terminal domain-containing protein | BvMPK_RS05420 | Not Available | Negative | 1336346 - 1338454 | 79949.1 |
| glycoside hydrolase family 105 protein | BvMPK_RS05425 | Not Available | Negative | 1338509 - 1339747 | 47229.2 |
| ump kinase | BvMPK_RS05430 | Not Available | Negative | 1340005 - 1340715 | 25575.2 |
| mate family efflux transporter | BvMPK_RS05435 | Not Available | Negative | 1340754 - 1342079 | 48941.7 |
| s41 family peptidase | BvMPK_RS05440 | Not Available | Positive | 1342238 - 1343677 | 54094.4 |
| biotin--[acetyl-coa-carboxylase] ligase | BvMPK_RS05445 | Not Available | Negative | 1343674 - 1344441 | 29241.9 |
| mmcq/yjbr family dna-binding protein | BvMPK_RS05450 | Not Available | Negative | 1344425 - 1344781 | 13937.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

