Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | BvMPK_RS05355 | Not Available | Negative | 1314266 - 1316173 | 73930.9 |
| fumarate hydratase | BvMPK_RS05360 | Not Available | Positive | 1316312 - 1317955 | 60487.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05365 | Not Available | Positive | 1318057 - 1320210 | 81581.9 |
| amino acid permease | BvMPK_RS05370 | Not Available | Negative | 1320383 - 1322041 | 59786.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05375 | Not Available | Negative | 1322130 - 1323446 | 49384.2 |
| efflux rnd transporter permease subunit | BvMPK_RS05380 | Not Available | Negative | 1323443 - 1326478 | 112030.0 |
| efflux rnd transporter periplasmic adaptor subunit | BvMPK_RS05385 | Not Available | Negative | 1326498 - 1327574 | 39686.0 |
| m28 family metallopeptidase | BvMPK_RS05390 | Not Available | Negative | 1327661 - 1328680 | 38319.7 |
| ribosome small subunit-dependent gtpase a | BvMPK_RS05395 | Not Available | Negative | 1328694 - 1329626 | 35098.8 |
| ribosome recycling factor | BvMPK_RS05400 | Not Available | Negative | 1329747 - 1330307 | 20738.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

