Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS05115 | Not Available | Negative | 1257974 - 1260543 | 96947.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05120 | Not Available | Negative | 1260547 - 1261642 | 42003.6 |
| 4fe-4s dicluster domain-containing protein | BvMPK_RS05125 | Not Available | Negative | 1261675 - 1262454 | 28385.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05130 | Not Available | Positive | 1263037 - 1263527 | 18873.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21620 | Not Available | Positive | 1263772 - 1264040 | 10224.2 |
| pl29 family lyase n-terminal domain-containing protein | BvMPK_RS05135 | Not Available | Positive | 1264089 - 1267214 | 117231.0 |
| clostripain-related cysteine peptidase | BvMPK_RS05140 | Not Available | Positive | 1267303 - 1268418 | 42000.7 |
| pl29 family lyase n-terminal domain-containing protein | BvMPK_RS05145 | Not Available | Negative | 1268633 - 1271338 | 98189.6 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21625 | Not Available | Negative | 1271454 - 1271747 | 11046.7 |
| duf4141 domain-containing protein | BvMPK_RS05150 | Not Available | Negative | 1271966 - 1272149 | 6609.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

