Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BvMPK_RS05065 | Not Available | Positive | 1240059 - 1243280 | 118838.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS05070 | Not Available | Positive | 1243294 - 1245141 | 69470.0 |
| sulfatase | BvMPK_RS05075 | Not Available | Positive | 1245165 - 1246739 | 61181.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05080 | Not Available | Negative | 1246796 - 1250682 | 146371.0 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | BvMPK_RS05085 | Not Available | Negative | 1250887 - 1253343 | 92146.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05090 | Not Available | Negative | 1253442 - 1254660 | 45559.1 |
| tigr00730 family rossman fold protein | BvMPK_RS05095 | Not Available | Positive | 1254763 - 1255296 | 19756.0 |
| sis domain-containing protein | BvMPK_RS05100 | Not Available | Positive | 1255314 - 1255916 | 21825.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05105 | Not Available | Positive | 1256021 - 1256936 | 32834.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS05110 | Not Available | Positive | 1256976 - 1258012 | 38219.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

