Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | BvMPK_RS04880 | Not Available | Positive | 1197916 - 1198671 | 27308.1 |
| arac family transcriptional regulator | BvMPK_RS04885 | Not Available | Negative | 1198736 - 1199596 | 33227.9 |
| fimbrillin family protein | BvMPK_RS04890 | Not Available | Negative | 1200095 - 1201078 | 35284.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04895 | Not Available | Negative | 1201127 - 1202121 | 36487.4 |
| duf3575 domain-containing protein | BvMPK_RS04900 | Not Available | Negative | 1202088 - 1203455 | 52136.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21605 | Not Available | Negative | 1203465 - 1203845 | 14765.8 |
| alpha-l-fucosidase | BvMPK_RS04905 | Not Available | Positive | 1204050 - 1205933 | 70587.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04910 | Not Available | Negative | 1206014 - 1207128 | 38976.7 |
| thioesterase family protein | BvMPK_RS04915 | Not Available | Negative | 1207125 - 1207532 | 15657.8 |
| pp_00984 | BvMPK_RS04920 | Not Available | Positive | 1207591 - 1208508 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

