Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain 29CaP |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
491352 bp
Thymine Count
499248 bp
Guanine Count
311836 bp
Cytosine Count
321991 bp
Genome Length
1624441 bp
Protein-coding Genes
1511 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | APV63_RS01405 | Q9ZMF4 | Negative | 282376 - 283491 | 41547.1 |
| cog3400 family protein | APV63_RS01410 | Not Available | Positive | 283548 - 284984 | 55901.1 |
| 3-dehydroquinate synthase | APV63_RS01415 | B5ZA49 | Positive | 284989 - 286020 | 38872.8 |
| mechanosensitive ion channel family protein | APV63_RS01420 | Q58111 | Positive | 286011 - 287582 | 60106.4 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | APV63_RS01425 | P56130 | Positive | 287579 - 288835 | 47843.7 |
| aaa family atpase | APV63_RS01430 | Q9TJ83 | Positive | 288822 - 290474 | 62939.8 |
| pimelyl-acp methyl ester esterase biov | APV63_RS01435 | Not Available | Positive | 290477 - 290995 | 20190.6 |
| duf4149 domain-containing protein | APV63_RS01440 | Not Available | Positive | 291008 - 291481 | 17587.3 |
| vacuolating cytotoxin domain-containing protein | APV63_RS01445 | Not Available | Positive | 291529 - 300255 | 313859.0 |
| diaminopimelate decarboxylase | APV63_RS01450 | B4XMC6 | Positive | 300303 - 301520 | 45338.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |







