Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This strain is notable for having a single replicon, indicating a straightforward genetic organization that may influence its replication and stability. The strain is cataloged under the accession number NZ_CP012900.1, which allows for its identification and retrieval from genomic databases. As a member of the Stenotrophomonas genus, this strain is likely to exhibit metabolic versatility, often thriving in diverse environments. In terms of biological and ecological significance, Stenotrophomonas species are known for their role in various biogeochemical cycles and their potential applications in bioremediation. They can utilize a range of organic compounds, which suggests that strain ZAC14D2_NAIMI4_2 may play a role in nutrient cycling in its native habitat. The presence of flagella may enhance its ability to colonize different niches, further contributing to its ecological adaptability. Overall, the traits of Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2 highlight its potential importance in both microbial ecology and practical applications in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas acidaminiphila
Strainstrain ZAC14D2_NAIMI4_2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2

Gene Summary

Adenine Count

654932 bp

Thymine Count

649276 bp

Guanine Count

1416320 bp

Cytosine Count

1417769 bp

Genome Length

4138297 bp

Protein-coding Genes

3618 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseAOT14_RS10760Not AvailableNegative2429401 - 243066645328.3
atp-binding proteinAOT14_RS10765Not AvailablePositive2430750 - 243198544047.4
response regulator transcription factorAOT14_RS10770Not AvailablePositive2431982 - 243254520559.7
sdr family oxidoreductaseAOT14_RS10775Not AvailableNegative2432579 - 243334625938.2
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseAOT14_RS10780Not AvailableNegative2433498 - 243608992706.3
type ii toxin-antitoxin system vapc family toxinAOT14_RS10785Not AvailableNegative2436131 - 243653214562.6
abrb/maze/spovt family dna-binding domain-containing proteinAOT14_RS10790Not AvailableNegative2436529 - 24367628237.91
aconitate hydratase acnaAOT14_RS10795Not AvailablePositive2437041 - 243979799044.0
dipeptidaseAOT14_RS10800Not AvailablePositive2440029 - 244117140152.1
replicative dna helicaseAOT14_RS10805Not AvailableNegative2441187 - 244260252294.1

Displaying genes 2281 – 2290 of 3759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.