Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This strain is notable for having a single replicon, indicating a straightforward genetic organization that may influence its replication and stability. The strain is cataloged under the accession number NZ_CP012900.1, which allows for its identification and retrieval from genomic databases. As a member of the Stenotrophomonas genus, this strain is likely to exhibit metabolic versatility, often thriving in diverse environments. In terms of biological and ecological significance, Stenotrophomonas species are known for their role in various biogeochemical cycles and their potential applications in bioremediation. They can utilize a range of organic compounds, which suggests that strain ZAC14D2_NAIMI4_2 may play a role in nutrient cycling in its native habitat. The presence of flagella may enhance its ability to colonize different niches, further contributing to its ecological adaptability. Overall, the traits of Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2 highlight its potential importance in both microbial ecology and practical applications in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas acidaminiphila
Strainstrain ZAC14D2_NAIMI4_2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas acidaminiphila strain ZAC14D2_NAIMI4_2

Gene Summary

Adenine Count

654932 bp

Thymine Count

649276 bp

Guanine Count

1416320 bp

Cytosine Count

1417769 bp

Genome Length

4138297 bp

Protein-coding Genes

3618 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinone-dependent dihydroorotate dehydrogenaseAOT14_RS10240Not AvailablePositive2313602 - 231465737507.3
udp-n-acetylmuramate dehydrogenaseAOT14_RS10245Not AvailablePositive2314654 - 231569437461.0
dmt family transporterAOT14_RS10250Not AvailablePositive2315745 - 231659030598.4
nucleotidyl transferase abieii/abigii toxin family proteinAOT14_RS10255Not AvailableNegative2316865 - 231778534227.5
type iv toxin-antitoxin system abiei family antitoxinAOT14_RS10260Not AvailableNegative2317782 - 231862131357.8
duf2274 domain-containing proteinAOT14_RS10265Not AvailableNegative2318647 - 23188748270.16
trbi/virb10 family proteinAOT14_RS10270Not AvailableNegative2318871 - 232013644497.7
p-type conjugative transfer protein trbgAOT14_RS10275Not AvailableNegative2320139 - 232114336098.5
conjugal transfer protein trbfAOT14_RS10280Not AvailableNegative2321140 - 232184426252.2
p-type conjugative transfer protein trblAOT14_RS10285Not AvailableNegative2321862 - 232321445142.9

Displaying genes 2171 – 2180 of 3759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.