Weissella cibaria strain CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative bacterium that exhibits facultative anaerobic growth, allowing it to thrive in diverse environments. This strain has been isolated from a variety of habitats, including Chili Bo, Korean kimchi, pasture, saliva, soil, and tropical fruits, indicating its adaptability and ecological versatility. The strain is associated with several hosts, including humans (Homo sapiens) and various plants and animals such as cabbage (Brassica oleracea var. capitata), broad beans (Vicia faba), dromedaries (Camelus dromedarius), rabbits (Oryctolagus cuniculus), and domestic dogs (Canis lupus familiaris). This host diversity suggests that Weissella cibaria strain CH2 may play important roles in different ecological niches, including human health and animal husbandry. With seven replicons identified, the genetic structure of Weissella cibaria strain CH2 is complex, which may contribute to its adaptability and potential interactions with various hosts. Although the strain is noted for pathogenicity in humans, the specific pathogenic mechanisms and implications remain to be clarified. In summary, Weissella cibaria strain CH2 exemplifies a microbiological entity with significant ecological roles across various habitats and hosts. Its adaptability as a facultative anaerobe and its presence in both human and animal systems suggest that it may be an important organism in understanding microbial dynamics within food fermentation processes and potential health impacts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
Strainstrain CH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain CH2 plasmid pMKC07, complete sequence.

Gene Summary

Adenine Count

843 bp

Thymine Count

802 bp

Guanine Count

676 bp

Cytosine Count

540 bp

Genome Length

2861 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan bridge formation glycyltransferase fema/femb family proteinAO080_RS09960Not AvailablePositive2101792 - 210282039064.2
ynce family proteinAO080_RS09965Not AvailableNegative2102908 - 210401741219.3
ribose-5-phosphate isomerase rpiaAO080_RS09970Not AvailableNegative2104058 - 210474424713.6
carboxyltransferase subunit alphaAO080_RS13130Not AvailableNegative2104859 - 210564428514.2
acetyl-coa carboxylase, carboxyltransferase subunit betaAO080_RS13135Not AvailableNegative2105644 - 210648930592.0
acetyl-coa carboxylase biotin carboxylase subunitAO080_RS09985Not AvailableNegative2106502 - 210787850410.6
3-hydroxyacyl-acp dehydratase fabzAO080_RS09990Not AvailableNegative2107880 - 210831115602.1
acetyl-coa carboxylase biotin carboxyl carrier proteinAO080_RS09995Not AvailableNegative2108324 - 210879116742.9
beta-ketoacyl-acp synthase iiAO080_RS10000Not AvailableNegative2108791 - 211002642482.1
3-oxoacyl-acp reductase family proteinAO080_RS10005Not AvailableNegative2110114 - 211083625247.6

Displaying genes 2161 – 2170 of 2556 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.