Weissella cibaria strain CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative bacterium that exhibits facultative anaerobic growth, allowing it to thrive in diverse environments. This strain has been isolated from a variety of habitats, including Chili Bo, Korean kimchi, pasture, saliva, soil, and tropical fruits, indicating its adaptability and ecological versatility. The strain is associated with several hosts, including humans (Homo sapiens) and various plants and animals such as cabbage (Brassica oleracea var. capitata), broad beans (Vicia faba), dromedaries (Camelus dromedarius), rabbits (Oryctolagus cuniculus), and domestic dogs (Canis lupus familiaris). This host diversity suggests that Weissella cibaria strain CH2 may play important roles in different ecological niches, including human health and animal husbandry. With seven replicons identified, the genetic structure of Weissella cibaria strain CH2 is complex, which may contribute to its adaptability and potential interactions with various hosts. Although the strain is noted for pathogenicity in humans, the specific pathogenic mechanisms and implications remain to be clarified. In summary, Weissella cibaria strain CH2 exemplifies a microbiological entity with significant ecological roles across various habitats and hosts. Its adaptability as a facultative anaerobe and its presence in both human and animal systems suggest that it may be an important organism in understanding microbial dynamics within food fermentation processes and potential health impacts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
Strainstrain CH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain CH2 plasmid pMKC07, complete sequence.

Gene Summary

Adenine Count

843 bp

Thymine Count

802 bp

Guanine Count

676 bp

Cytosine Count

540 bp

Genome Length

2861 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type 2 isopentenyl-diphosphate delta-isomeraseAO080_RS08165Not AvailableNegative1712972 - 171400937607.8
phosphomevalonate kinaseAO080_RS08170Not AvailableNegative1714021 - 171507937259.1
diphosphomevalonate decarboxylaseAO080_RS08175Not AvailableNegative1715079 - 171606535192.7
mevalonate kinaseAO080_RS08180Not AvailableNegative1716075 - 171703133746.4
helicase c-terminal domain-containing proteinAO080_RS08185Not AvailablePositive1717151 - 1719973106037.0
duf5590 domain-containing proteinAO080_RS08190Not AvailablePositive1720037 - 172054919333.8
asparagine--trna ligaseAO080_RS08195Not AvailablePositive1720579 - 172187449931.0
dnad domain-containing proteinAO080_RS08200Not AvailablePositive1721965 - 172270528254.5
pbp1a family penicillin-binding proteinAO080_RS08205Not AvailableNegative1722744 - 172508083799.9
holliday junction resolvase recuAO080_RS08210Not AvailableNegative1725099 - 172570122594.8

Displaying genes 1791 – 1800 of 2556 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.