Weissella cibaria strain CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative bacterium that exhibits facultative anaerobic growth, allowing it to thrive in diverse environments. This strain has been isolated from a variety of habitats, including Chili Bo, Korean kimchi, pasture, saliva, soil, and tropical fruits, indicating its adaptability and ecological versatility. The strain is associated with several hosts, including humans (Homo sapiens) and various plants and animals such as cabbage (Brassica oleracea var. capitata), broad beans (Vicia faba), dromedaries (Camelus dromedarius), rabbits (Oryctolagus cuniculus), and domestic dogs (Canis lupus familiaris). This host diversity suggests that Weissella cibaria strain CH2 may play important roles in different ecological niches, including human health and animal husbandry. With seven replicons identified, the genetic structure of Weissella cibaria strain CH2 is complex, which may contribute to its adaptability and potential interactions with various hosts. Although the strain is noted for pathogenicity in humans, the specific pathogenic mechanisms and implications remain to be clarified. In summary, Weissella cibaria strain CH2 exemplifies a microbiological entity with significant ecological roles across various habitats and hosts. Its adaptability as a facultative anaerobe and its presence in both human and animal systems suggest that it may be an important organism in understanding microbial dynamics within food fermentation processes and potential health impacts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
Strainstrain CH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain CH2 plasmid pMKC07, complete sequence.

Gene Summary

Adenine Count

843 bp

Thymine Count

802 bp

Guanine Count

676 bp

Cytosine Count

540 bp

Genome Length

2861 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s5AO080_RS03770Not AvailablePositive805870 - 80637317168.7
50s ribosomal protein l30AO080_RS03775Not AvailablePositive806385 - 8065706503.19
50s ribosomal protein l15AO080_RS03780Not AvailablePositive806608 - 80704215393.6
preprotein translocase subunit secyAO080_RS03785Not AvailablePositive807042 - 80834947872.7
adenylate kinaseAO080_RS03790Not AvailablePositive808346 - 80891520588.8
translation initiation factor if-1AO080_RS03795Not AvailablePositive809008 - 8092237936.77
50s ribosomal protein l36AO080_RS03800Not AvailablePositive809258 - 8093774409.63
30s ribosomal protein s13AO080_RS03805Not AvailablePositive809430 - 80979513313.2
30s ribosomal protein s11AO080_RS03810Not AvailablePositive809827 - 81021313421.2
dna-directed rna polymerase subunit alphaAO080_RS03815Not AvailablePositive810265 - 81120934576.9

Displaying genes 991 – 1000 of 2556 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.