Psychrobacter urativorans strain R310.10B

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter urativorans strain R310.10B is characterized by the presence of flagella, which suggests potential motility in aquatic environments. This trait may enhance its ability to navigate through various substrates or interact with other microorganisms in its ecological niche. The strain is noteworthy for containing six replicons, indicating a complex genetic organization that may contribute to its adaptability and resilience in diverse conditions. The strain is documented under several accessions, including NZ_CP012678.1, NZ_CP012708.1, NZ_CP012710.1, NZ_CP012711.1, NZ_CP012709.1, and NZ_CP012707.1. These accessions provide a valuable reference for genetic studies and further exploration of its genomic features. From a biological perspective, the combination of motility due to flagella and the genetic complexity reflected in its multiple replicons may allow Psychrobacter urativorans strain R310.10B to thrive in cold environments, where psychrophilic bacteria are often found. Such adaptations could play a significant role in nutrient cycling in polar or deep-sea ecosystems, where this strain may contribute to the breakdown of organic matter or participate in biogeochemical processes. Understanding these traits can help elucidate the ecological roles of Psychrobacter species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter urativorans
Strainstrain R310.10B

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter urativorans strain R310.10B plasmid 3, complete

Gene Summary

Adenine Count

7228 bp

Thymine Count

7317 bp

Guanine Count

4620 bp

Cytosine Count

5045 bp

Genome Length

24210 bp

Protein-coding Genes

22 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhAOC03_RS08635Not AvailableNegative2016007 - 201649517834.6
duf421 domain-containing proteinAOC03_RS08640Not AvailableNegative2016593 - 201712319506.7
abzj_00895 family proteinAOC03_RS08645Not AvailableNegative2017318 - 201781818451.3
sh3 domain-containing proteinAOC03_RS08650Not AvailablePositive2018219 - 201877320273.9
m15 family metallopeptidaseAOC03_RS08655Not AvailablePositive2018789 - 202001544950.3
3'-5' exonucleaseAOC03_RS08660Not AvailableNegative2020153 - 202075822568.4
duf294 nucleotidyltransferase-like domain-containing proteinAOC03_RS08665Not AvailableNegative2020777 - 202278975591.5
succinyldiaminopimelate transaminaseAOC03_RS08670Not AvailableNegative2022992 - 202424547006.2
hypothetical proteinAOC03_RS08675Not AvailablePositive2024490 - 202512524997.7
[protein-pii] uridylyltransferaseAOC03_RS08680Not AvailableNegative2025227 - 2027953103947.0

Displaying genes 1851 – 1860 of 2517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.