Psychrobacter urativorans strain R310.10B

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter urativorans strain R310.10B is characterized by the presence of flagella, which suggests potential motility in aquatic environments. This trait may enhance its ability to navigate through various substrates or interact with other microorganisms in its ecological niche. The strain is noteworthy for containing six replicons, indicating a complex genetic organization that may contribute to its adaptability and resilience in diverse conditions. The strain is documented under several accessions, including NZ_CP012678.1, NZ_CP012708.1, NZ_CP012710.1, NZ_CP012711.1, NZ_CP012709.1, and NZ_CP012707.1. These accessions provide a valuable reference for genetic studies and further exploration of its genomic features. From a biological perspective, the combination of motility due to flagella and the genetic complexity reflected in its multiple replicons may allow Psychrobacter urativorans strain R310.10B to thrive in cold environments, where psychrophilic bacteria are often found. Such adaptations could play a significant role in nutrient cycling in polar or deep-sea ecosystems, where this strain may contribute to the breakdown of organic matter or participate in biogeochemical processes. Understanding these traits can help elucidate the ecological roles of Psychrobacter species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter urativorans
Strainstrain R310.10B

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter urativorans strain R310.10B plasmid 3, complete

Gene Summary

Adenine Count

7228 bp

Thymine Count

7317 bp

Guanine Count

4620 bp

Cytosine Count

5045 bp

Genome Length

24210 bp

Protein-coding Genes

22 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii 3-dehydroquinate dehydrataseAOC03_RS00220Not AvailableNegative46871 - 4740719431.2
cold shock domain-containing proteinAOC03_RS00225Not AvailablePositive47836 - 480518053.38
dead/deah box helicaseAOC03_RS00230Not AvailablePositive48252 - 4940643680.3
sulfite exporter taue/safe family proteinAOC03_RS00235Not AvailableNegative49589 - 5049132118.3
cbb3-type cytochrome oxidase assembly protein ccosAOC03_RS00240Not AvailableNegative50620 - 5089510490.3
ydcf family proteinAOC03_RS00245Not AvailableNegative51057 - 5182728989.3
udp-n-acetylmuramate dehydrogenaseAOC03_RS00250Not AvailableNegative51817 - 5284537374.2
low molecular weight protein-tyrosine-phosphataseAOC03_RS00255Not AvailableNegative53121 - 5361818157.2
rna-binding s4 domain-containing proteinAOC03_RS00260Not AvailableNegative53861 - 5428015844.6
excalibur calcium-binding domain-containing proteinAOC03_RS12770Not AvailableNegative54406 - 5476213074.3

Displaying genes 161 – 170 of 2517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.