Psychrobacter urativorans strain R310.10B

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter urativorans strain R310.10B is characterized by the presence of flagella, which suggests potential motility in aquatic environments. This trait may enhance its ability to navigate through various substrates or interact with other microorganisms in its ecological niche. The strain is noteworthy for containing six replicons, indicating a complex genetic organization that may contribute to its adaptability and resilience in diverse conditions. The strain is documented under several accessions, including NZ_CP012678.1, NZ_CP012708.1, NZ_CP012710.1, NZ_CP012711.1, NZ_CP012709.1, and NZ_CP012707.1. These accessions provide a valuable reference for genetic studies and further exploration of its genomic features. From a biological perspective, the combination of motility due to flagella and the genetic complexity reflected in its multiple replicons may allow Psychrobacter urativorans strain R310.10B to thrive in cold environments, where psychrophilic bacteria are often found. Such adaptations could play a significant role in nutrient cycling in polar or deep-sea ecosystems, where this strain may contribute to the breakdown of organic matter or participate in biogeochemical processes. Understanding these traits can help elucidate the ecological roles of Psychrobacter species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter urativorans
Strainstrain R310.10B

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter urativorans strain R310.10B plasmid 3, complete

Gene Summary

Adenine Count

7228 bp

Thymine Count

7317 bp

Guanine Count

4620 bp

Cytosine Count

5045 bp

Genome Length

24210 bp

Protein-coding Genes

22 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylalanine--trna ligase subunit betaAOC03_RS05530Not AvailableNegative1279866 - 128227788219.5
phenylalanine--trna ligase subunit alphaAOC03_RS05535Not AvailableNegative1282333 - 128338839437.1
50s ribosomal protein l20AOC03_RS05540Not AvailableNegative1283689 - 128404513507.7
50s ribosomal protein l35AOC03_RS05545Not AvailableNegative1284145 - 12843427571.62
thioesteraseAOC03_RS05550Not AvailablePositive1284933 - 128537616692.0
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieAOC03_RS05555Not AvailablePositive1285471 - 128629830437.6
rrf2 family transcriptional regulatorAOC03_RS05560Not AvailablePositive1286452 - 12865473415.4
sec-independent protein translocase subunit tataAOC03_RS05565Not AvailablePositive1286615 - 128689310105.1
sec-independent protein translocase protein tatbAOC03_RS05570Not AvailablePositive1286954 - 128766726929.5
twin-arginine translocase subunit tatcAOC03_RS05575Not AvailablePositive1287664 - 128853332289.6

Displaying genes 1231 – 1240 of 2517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.