Arthrobacter alpinus strain R3.8

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter alpinus strain R3.8 is characterized by the presence of flagella, which suggests it possesses the capacity for motility. This trait may facilitate its movement in various environments, potentially influencing its ecological interactions. The strain has a single replicon, indicating a streamlined genomic organization that can contribute to its adaptability and efficiency in resource utilization. The genomic information for Arthrobacter alpinus strain R3.8 is cataloged under the accession number NZ_CP012677.1, providing a reference point for further studies and comparisons with other strains within the Arthrobacter genus. The presence of flagella combined with its genomic features could imply that Arthrobacter alpinus strain R3.8 plays a significant role in its ecological niche, possibly engaging in nutrient cycling or bioremediation processes. Its motility may enhance its ability to colonize diverse habitats, thereby impacting microbial community dynamics. Understanding these traits is essential for appreciating the ecological significance of this strain within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter alpinus
Strainstrain R3.8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter alpinus strain R3.8 chromosome, complete genome.

Gene Summary

Adenine Count

764043 bp

Thymine Count

765655 bp

Guanine Count

1263708 bp

Cytosine Count

1253047 bp

Genome Length

4046453 bp

Protein-coding Genes

3652 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-serNot AvailableNot AvailablePositive3739746 - 3739833Not Available
glutathione peroxidaseAOC05_RS17130O22448Positive3739929 - 374040816987.2
hypothetical proteinAOC05_RS17135Not AvailableNegative3740423 - 374131031515.3
type ii toxin-antitoxin system vapb family antitoxinAOC05_RS17140Not AvailablePositive3741450 - 374174911236.5
lytr c-terminal domain-containing proteinAOC05_RS17145Not AvailablePositive3741742 - 374253928061.2
tetr/acrr family transcriptional regulatorAOC05_RS17150Not AvailableNegative3742549 - 374317522383.7
type ii toxin-antitoxin system hipa family toxinAOC05_RS17155Not AvailableNegative3743221 - 374448344722.1
helix-turn-helix domain-containing proteinAOC05_RS17160Not AvailableNegative3744480 - 37446867331.74
type iv toxin-antitoxin system abiei family antitoxin domain-containing proteinAOC05_RS17165Not AvailableNegative3744979 - 374598037246.0
kynureninaseAOC05_RS17170Not AvailableNegative3746145 - 374741046063.9

Displaying genes 3451 – 3460 of 3744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

274 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 274 metabolites

Health Effects

No health effects information available for this bacterium.