Frigidibacter mobilis strain cai42

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Frigidibacter

Description

Frigidibacter mobilis strain cai42 is characterized by its possession of three replicons, which may contribute to its genetic diversity and adaptability. The strain is identified by several accession numbers, specifically NZ_CP012661.1, NZ_CP012662.1, and NZ_CP012664.1, indicating the sequence data available for this organism in genomic databases. The presence of multiple replicons suggests a potential for horizontal gene transfer and may play a role in the strain's ability to thrive in varied environmental conditions. This trait is particularly relevant for microorganisms that inhabit extreme environments, as it may facilitate the acquisition of beneficial genes that enhance survival and metabolic capabilities. In terms of ecological relevance, Frigidibacter mobilis strain cai42's adaptability may allow it to occupy niche environments where few other organisms can survive, contributing to biogeochemical cycles and microbial diversity. This adaptability can be crucial for understanding microbial roles in polar or cold environments, where such strains might be involved in the degradation of organic matter or in nutrient cycling processes. Thus, the genetic features of Frigidibacter mobilis strain cai42 underscore its significance in microbial ecology, particularly in the context of its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusFrigidibacter
SpeciesFrigidibacter mobilis
Strainstrain cai42

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigidibacter mobilis strain cai42 chromosome, complete genome.

Gene Summary

Adenine Count

791724 bp

Thymine Count

785546 bp

Guanine Count

1576603 bp

Cytosine Count

1584425 bp

Genome Length

4738298 bp

Protein-coding Genes

4660 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseAKL17_RS19730Not AvailableNegative4159537 - 416112355509.2
fad-linked oxidase c-terminal domain-containing proteinAKL17_RS19735Not AvailableNegative4161137 - 416285761199.1
rsmb/nop family class i sam-dependent rna methyltransferaseAKL17_RS27765Not AvailableNegative4163144 - 416394728013.6
transcription antitermination factor nusbAKL17_RS27770Not AvailableNegative4163908 - 416442918390.6
duf1674 domain-containing proteinAKL17_RS19745Not AvailablePositive4164533 - 41647276866.04
4-hydroxy-tetrahydrodipicolinate reductaseAKL17_RS19750Not AvailableNegative4164745 - 416555427541.2
30s ribosome-binding factor rbfaAKL17_RS19755Not AvailablePositive4165641 - 416606615929.0
phosphodiester glycosidase family proteinAKL17_RS19760Not AvailablePositive4166050 - 416679025757.7
trna pseudouridine(55) synthase trubAKL17_RS19765Not AvailablePositive4166845 - 416774731961.0
calcium-binding proteinAKL17_RS19770Not AvailablePositive4167876 - 416903038464.1

Displaying genes 4171 – 4180 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.