Frigidibacter mobilis strain cai42

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Frigidibacter

Description

Frigidibacter mobilis strain cai42 is characterized by its possession of three replicons, which may contribute to its genetic diversity and adaptability. The strain is identified by several accession numbers, specifically NZ_CP012661.1, NZ_CP012662.1, and NZ_CP012664.1, indicating the sequence data available for this organism in genomic databases. The presence of multiple replicons suggests a potential for horizontal gene transfer and may play a role in the strain's ability to thrive in varied environmental conditions. This trait is particularly relevant for microorganisms that inhabit extreme environments, as it may facilitate the acquisition of beneficial genes that enhance survival and metabolic capabilities. In terms of ecological relevance, Frigidibacter mobilis strain cai42's adaptability may allow it to occupy niche environments where few other organisms can survive, contributing to biogeochemical cycles and microbial diversity. This adaptability can be crucial for understanding microbial roles in polar or cold environments, where such strains might be involved in the degradation of organic matter or in nutrient cycling processes. Thus, the genetic features of Frigidibacter mobilis strain cai42 underscore its significance in microbial ecology, particularly in the context of its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusFrigidibacter
SpeciesFrigidibacter mobilis
Strainstrain cai42

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigidibacter mobilis strain cai42 chromosome, complete genome.

Gene Summary

Adenine Count

791724 bp

Thymine Count

785546 bp

Guanine Count

1576603 bp

Cytosine Count

1584425 bp

Genome Length

4738298 bp

Protein-coding Genes

4660 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-oxoadipate enol-lactonaseAKL17_RS17515Not AvailableNegative3682766 - 368355127245.9
lysr substrate-binding domain-containing proteinAKL17_RS17520Not AvailablePositive3683629 - 368453432056.6
bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family proteinAKL17_RS17525Not AvailableNegative3684531 - 368641167881.8
shikimate dehydrogenase family proteinAKL17_RS17530Not AvailableNegative3686408 - 368725329327.2
hypothetical proteinAKL17_RS17535Not AvailableNegative3687250 - 36874295860.1
tripartite tricarboxylate transporter permeaseAKL17_RS17540Not AvailableNegative3687470 - 368896652369.9
tripartite tricarboxylate transporter tctb family proteinAKL17_RS17545Not AvailableNegative3688968 - 368948318739.0
bug family tripartite tricarboxylate transporter substrate binding proteinAKL17_RS17550Not AvailableNegative3689603 - 369059534274.2
lysr family transcriptional regulatorAKL17_RS17555Not AvailableNegative3690713 - 369164234144.4
iclr family transcriptional regulatorAKL17_RS17560Not AvailablePositive3691737 - 369252226902.6

Displaying genes 3691 – 3700 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.