Streptococcus gordonii strain KCOM 1506 (= ChDC B679)

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus gordonii strain KCOM 1506, also known as ChDC B679, is a Gram-positive cocci bacterium predominantly found in association with its host, Homo sapiens. This strain exhibits a characteristic arrangement of cells in chains and pairs, reflecting its typical growth pattern within the oral cavity and other human-associated environments. As a facultative anaerobe, S. gordonii can thrive in both aerobic and anaerobic conditions, which is advantageous for survival in the variable oxygen levels encountered in the human mouth. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic range, which is typical for many human-associated microorganisms. S. gordonii strain KCOM 1506 lacks mobility, as it does not possess flagella, and it features a single membrane with one replicon. This bacterium is considered free-living, indicating its ability to reside independently within its ecological niche, while also being part of the complex microbial community found in humans. The presence of S. gordonii in the human microbiome is significant, as it plays a role in oral health and may influence the development of dental biofilms. Understanding the traits of this strain contributes to our knowledge of its ecological interactions within the human host and its potential implications for health and disease. The accession number for this strain is NZ_CP012648.1, which provides a reference for further genomic studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus gordonii
Strainstrain KCOM 1506 (= ChDC B679)

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus gordonii strain KCOM 1506 (= ChDC B679)
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptococcus gordonii strain KCOM 1506 (= ChDC B679) chromosome,

Gene Summary

Adenine Count

677467 bp

Thymine Count

679303 bp

Guanine Count

460959 bp

Cytosine Count

465577 bp

Genome Length

2283306 bp

Protein-coding Genes

2124 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
g5 domain-containing proteinRN86_RS03750Not AvailablePositive778270 - 77965549830.2
Trna-cysNot AvailableNot AvailablePositive779880 - 779950Not Available
30s ribosomal protein s2RN86_RS03760A8AZP1Positive780235 - 78101729144.9
translation elongation factor tsRN86_RS03765A8AZP0Positive781096 - 78213937309.4
hypothetical proteinRN86_RS03770Not AvailableNegative782247 - 78259713604.2
ctsr family transcriptional regulatorRN86_RS03775P37568Positive782916 - 78337417250.0
atp-dependent clp protease atp-binding subunitRN86_RS03780Q2FJB5Positive783381 - 78581090126.1
aaa family atpaseRN86_RS03785Not AvailablePositive786033 - 78709140788.9
nicotinamide riboside transporter pnucRN86_RS03790Not AvailablePositive787113 - 78792831076.0
nudix hydrolaseRN86_RS03795Not AvailablePositive787972 - 78876030127.2

Displaying genes 821 – 830 of 2257 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

100 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0001140cyclohexyl isocyanideC7H11NChemical structure of cyclohexyl isocyanideNot available
Average109.1689Da
Monoisotopic109.089149357Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da

Displaying 1–10 of 100 metabolites

Health Effects

No health effects information available for this bacterium.