Escherichia coli strain 06-00048

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 06-00048 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic, capable of thriving in both aerobic and anaerobic environments. This strain exhibits mobility and possesses flagella, which contributes to its ability to move within its host-associated habitats. The optimal growth temperature for E. coli 06-00048 is 37°C, placing it within the mesophilic temperature range. This strain is free-living but has a diverse range of hosts, including Homo sapiens (humans), various livestock such as Gallus gallus (chickens) and Bos taurus (cattle), as well as other mammals and even some plants like Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). E. coli 06-00048 is known to cause a variety of health issues, particularly in humans, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as hemolytic uremic syndrome (HUS) and neonatal meningitis. The strain's pathogenicity is primarily associated with human hosts, leading to various complications including diarrhea, peritonitis, and septicemia. Understanding the broad host range and health impacts of E. coli 06-00048 can provide insights into the ecological interactions between this bacterium and its hosts, as well as the potential for zoonotic transmission. Its presence in both human and animal populations underscores the importance of monitoring this strain in public health and veterinary contexts to mitigate its associated risks.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 06-00048

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 06-00048
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 06-00048


Gene Summary

Adenine Count

57677 bp

Thymine Count

58195 bp

Guanine Count

52255 bp

Cytosine Count

45720 bp

Genome Length

213847 bp

Protein-coding Genes

239 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is3 family transposaseGJ11_RS00805P16940Positive368 - 67612049.0
is3 family transposaseGJ11_RS00810Not AvailablePositive677 - 117119075.8
glycosyltransferase family proteinGJ11_RS00815Not AvailablePositive1547 - 270743689.0
glycosyltransferase family 4 proteinGJ11_RS00820P26388Positive2730 - 397746391.9
glycosyltransferase family 4 proteinGJ11_RS00825Not AvailablePositive3974 - 514342776.6
abc transporter atp-binding proteinGJ11_RS00830Q3J7R8Positive5133 - 694767089.6
aminoglycoside phosphotransferase family proteinGJ11_RS00835Not AvailablePositive6937 - 822348581.5
phosphotransferaseGJ11_RS00840Not AvailablePositive8198 - 921138473.6
alginate export family proteinGJ11_RS00845Not AvailablePositive9388 - 1053344178.6
nucleotide sugar dehydrogenaseGJ11_RS00850Q04873Positive10565 - 1173744449.5

Displaying genes 1 – 10 of 239 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00007183-maleylpyruvateC7H4O6Chemical structure of 3-maleylpyruvateNot available
Average184.104Da
Monoisotopic184.001885009Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00031592,5-dihydroxybenzoateC7H5O4Chemical structure of 2,5-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.0193322Da

Displaying 1–4 of 4 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total