Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gentisate 1,2-dioxygenase | GJ11_RS00950 | Q9S3U6 | Positive | 31283 - 32311 | 38409.2 |
| fumarylacetoacetate hydrolase family protein | GJ11_RS00955 | O86042 | Positive | 32327 - 33028 | 25768.6 |
| maleylacetoacetate isomerase | GJ11_RS00960 | Q9KSB2 | Positive | 33037 - 33681 | 24286.1 |
| 3-hydroxybenzoate 6-monooxygenase | GJ11_RS00965 | Q5EXK1 | Positive | 33696 - 34889 | 43965.4 |
| is3-like element isecb1 family transposase | GJ11_RS00970 | Not Available | Positive | 35117 - 36474 | 52275.3 |
| hypothetical protein | GJ11_RS00975 | Not Available | Positive | 36584 - 36772 | 6794.35 |
| type ii toxin-antitoxin system antitoxin yaca | GJ11_RS00980 | Not Available | Positive | 37215 - 37484 | 10240.2 |
| type ii toxin-antitoxin system toxin yacb | GJ11_RS00985 | Not Available | Positive | 37484 - 37762 | 10772.9 |
| is3 family transposase | GJ11_RS29635 | Not Available | Positive | 38094 - 38558 | 18206.6 |
| is3 family transposase | GJ11_RS00995 | Not Available | Negative | 40223 - 40364 | 4499.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




