Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | GJ11_RS01860 | P26950 | Negative | 197060 - 197803 | 28488.6 |
| fimbria/pilus periplasmic chaperone | GJ11_RS01865 | P53516 | Positive | 198123 - 198914 | 29214.1 |
| fimbria/pilus outer membrane usher protein | GJ11_RS01870 | P53517 | Positive | 198998 - 201526 | 92975.3 |
| afad family invasin | GJ11_RS01875 | Not Available | Positive | 201540 - 201974 | 15971.1 |
| hypothetical protein | GJ11_RS01880 | Not Available | Positive | 202507 - 203025 | 17770.8 |
| is3 family transposase | GJ11_RS01885 | Not Available | Positive | 203100 - 203222 | 4641.49 |
| is3 family transposase | GJ11_RS01890 | Not Available | Negative | 203254 - 203796 | 20504.3 |
| is66 family transposase | GJ11_RS01895 | Not Available | Negative | 203828 - 205420 | 60572.2 |
| is66 family insertion sequence element accessory protein tnpb | GJ11_RS01900 | Not Available | Negative | 205451 - 205801 | 13169.2 |
| is66-like element accessory protein tnpa | GJ11_RS01905 | Not Available | Negative | 205798 - 206217 | 15719.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




