Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system impa family n-terminal domain-containing protein | GJ11_RS01715 | Not Available | Positive | 171793 - 172878 | 42289.6 |
| avrpphf family type iii effector | GJ11_RS01720 | Not Available | Positive | 173188 - 173784 | 22405.2 |
| hypothetical protein | GJ11_RS01725 | Not Available | Positive | 173856 - 174464 | 23300.2 |
| is3 family transposase | GJ11_RS01730 | Not Available | Positive | 174618 - 174753 | 5322.75 |
| is3 family transposase | GJ11_RS01735 | Not Available | Positive | 174769 - 175269 | 17169.8 |
| is3 family transposase | GJ11_RS29155 | Not Available | Positive | 175281 - 175410 | 4872.07 |
| is3 family transposase | GJ11_RS01740 | P03832 | Positive | 175405 - 175731 | 12248.0 |
| is3 family transposase | GJ11_RS01745 | P24577 | Positive | 175848 - 176958 | 43633.6 |
| hypothetical protein | GJ11_RS01750 | Not Available | Positive | 177068 - 177436 | 14270.1 |
| hypothetical protein | GJ11_RS01755 | Not Available | Positive | 177683 - 178246 | 21311.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




