Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | GJ11_RS00855 | Not Available | Positive | 11939 - 12091 | 5786.08 |
| is3 family transposase | GJ11_RS00860 | P50360 | Positive | 12124 - 12537 | 15485.4 |
| formate dehydrogenase-n subunit gamma | GJ11_RS00865 | P0AEK8 | Negative | 12629 - 13282 | 25390.9 |
| formate dehydrogenase subunit beta | GJ11_RS00870 | P0AAJ3 | Negative | 13275 - 14162 | 32410.7 |
| formate dehydrogenase-n subunit alpha | GJ11_RS00875 | P24183 | Negative | 14175 - 17225 | 113451.0 |
| hypothetical protein | GJ11_RS00880 | Not Available | Negative | 17582 - 17758 | 6483.81 |
| hypothetical protein | GJ11_RS29510 | P0A1V2 | Positive | 17890 - 18021 | 4934.77 |
| is21-like element helper atpase istb | GJ11_RS00885 | P15026 | Negative | 18065 - 18847 | 29431.7 |
| is3 family transposase | GJ11_RS00890 | Not Available | Negative | 18844 - 19844 | 38270.5 |
| is3 family transposase | GJ11_RS00895 | Q79CE8 | Positive | 19858 - 20343 | 18395.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




