Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | GJ11_RS01665 | Not Available | Positive | 158127 - 159203 | 41965.6 |
| type vi secretion lipoprotein tssj | GJ11_RS01670 | Not Available | Positive | 159211 - 159762 | 20250.7 |
| type vi secretion system baseplate subunit tssk | GJ11_RS01675 | Not Available | Positive | 159781 - 161133 | 52896.1 |
| is3 family transposase | GJ11_RS01680 | Not Available | Positive | 161651 - 162666 | 38554.4 |
| dotu family type iv/vi secretion system protein | GJ11_RS01685 | Not Available | Positive | 163188 - 163778 | 22936.8 |
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | GJ11_RS01690 | Not Available | Positive | 163785 - 167189 | 131923.0 |
| type vi secretion system atpase tssh | GJ11_RS01695 | Q9I742 | Positive | 167193 - 169724 | 94353.8 |
| is3 family transposase | GJ11_RS01700 | P16944 | Positive | 169980 - 170317 | 13427.3 |
| is3 family transposase | GJ11_RS29150 | P16942 | Positive | 170826 - 171194 | 13375.5 |
| is3 family transposase | GJ11_RS01710 | P0CF79 | Positive | 171232 - 171497 | 9266.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




