Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GJ11_RS29145 | Not Available | Positive | 148610 - 149179 | 21404.8 |
| type vi secretion system contractile sheath small subunit | GJ11_RS01620 | Not Available | Positive | 149717 - 150193 | 17974.2 |
| type vi secretion system contractile sheath large subunit | GJ11_RS01625 | Q9I748 | Positive | 150196 - 151674 | 55278.3 |
| hypothetical protein | GJ11_RS01630 | Not Available | Positive | 151684 - 152190 | 18851.3 |
| lysozyme family protein | GJ11_RS01635 | Not Available | Positive | 152201 - 152623 | 16041.7 |
| type vi secretion system baseplate subunit tssf | GJ11_RS01640 | Q9I744 | Positive | 152616 - 154418 | 68746.5 |
| type vi secretion system baseplate subunit tssg | GJ11_RS01645 | Not Available | Positive | 154409 - 155341 | 35289.1 |
| type vi secretion system vgr family protein | GJ11_RS01650 | Q9I0F3 | Positive | 155354 - 157336 | 73640.5 |
| duf6931 family protein | GJ11_RS01655 | Not Available | Positive | 157347 - 157808 | 17295.4 |
| paar domain-containing protein | GJ11_RS01660 | Not Available | Positive | 157824 - 158123 | 9826.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




