Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbd | GJ11_RS01365 | P41070 | Positive | 105678 - 105998 | 11483.2 |
| conjugal transfer protein trbg | GJ11_RS01370 | P41072 | Positive | 105991 - 106242 | 9112.79 |
| type iv conjugative transfer system lipoprotein trav | GJ11_RS01375 | P41069 | Positive | 106239 - 106754 | 18454.2 |
| conjugal transfer protein trar | GJ11_RS01380 | P41065 | Positive | 106889 - 107110 | 8271.9 |
| type iv secretion system protein trac | GJ11_RS01385 | P18004 | Positive | 107270 - 109897 | 99409.7 |
| type-f conjugative transfer system protein trbi | GJ11_RS01390 | P18006 | Positive | 109894 - 110280 | 14354.3 |
| type-f conjugative transfer system protein traw | GJ11_RS01395 | P18472 | Positive | 110277 - 110909 | 23604.7 |
| conjugal transfer pilus assembly protein trau | GJ11_RS01400 | P18471 | Positive | 110906 - 111898 | 36665.5 |
| hypothetical protein | GJ11_RS01405 | Not Available | Positive | 112303 - 112824 | 20475.2 |
| type-f conjugative transfer system pilin assembly protein trbc | GJ11_RS01410 | P18473 | Positive | 112851 - 113489 | 23516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




