Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 06-00048 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
57677 bp
Thymine Count
58195 bp
Guanine Count
52255 bp
Cytosine Count
45720 bp
Genome Length
213847 bp
Protein-coding Genes
239 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning/stability family protein | GJ11_RS01230 | Not Available | Negative | 83085 - 83480 | 14781.7 |
| plasmid segregation protein parm | GJ11_RS01235 | P11904 | Negative | 83480 - 84439 | 35566.5 |
| is3 family transposase | GJ11_RS01240 | Q1R1W4 | Positive | 84665 - 84967 | 11483.8 |
| is3 family transposase | GJ11_RS29120 | Not Available | Positive | 85043 - 85114 | 2745.41 |
| hnh endonuclease | GJ11_RS29125 | Not Available | Negative | 85196 - 85534 | 12708.5 |
| is21-like element isec10 family transposase | GJ11_RS01250 | Not Available | Positive | 85677 - 87176 | 57397.4 |
| is21-like element isec10 family helper atpase istb | GJ11_RS01255 | Not Available | Positive | 87173 - 87928 | 28552.3 |
| group ii intron reverse transcriptase/maturase | GJ11_RS01260 | P19593 | Negative | 87819 - 89312 | 56842.6 |
| is3 family transposase | GJ11_RS01265 | Q9S4X2 | Positive | 89934 - 90545 | 22838.1 |
| is3 family transposase | GJ11_RS01270 | Q9S4X1 | Positive | 90542 - 90763 | 8513.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




