Thiopseudomonas alkaliphila strain E5571

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Thiopseudomonas

Description

Thiopseudomonas alkaliphila strain E5571 is characterized by a single replicon, which indicates a streamlined genetic organization that may contribute to its adaptability within specific environments. This strain has been cataloged under the accession number NZ_CP012365.1, providing a reference point for genomic studies and comparative analyses with other microorganisms. As a member of the Thiopseudomonas genus, this strain is likely to exhibit metabolic capabilities associated with sulfur and nitrogen cycles, typical of many organisms within this group. These metabolic pathways are significant for the biogeochemical cycling of elements in alkaline environments, where Thiopseudomonas alkaliphila is typically found. The ecological role of Thiopseudomonas alkaliphila strain E5571 can be inferred from its physiological traits, as it may participate in the oxidation of inorganic sulfur compounds, contributing to the maintenance of ecosystem health in alkaline habitats. This process is essential for the detoxification of sulfur compounds and the promotion of nutrient availability in such environments. In summary, the single replicon and the unique accession number of Thiopseudomonas alkaliphila strain E5571 serve as essential identifiers for understanding its ecological and metabolic roles, particularly in alkaline ecosystems where it may play a vital role in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusThiopseudomonas
SpeciesThiopseudomonas alkaliphila
Strainstrain E5571

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiopseudomonas alkaliphila strain E5571 chromosome.

Gene Summary

Adenine Count

633280 bp

Thymine Count

629959 bp

Guanine Count

566539 bp

Cytosine Count

562930 bp

Genome Length

2397029 bp

Protein-coding Genes

2211 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAKN88_RS08250Not AvailablePositive1725557 - 172638730405.4
ribosomal protein s18-alanine n-acetyltransferaseAKN88_RS08255Not AvailablePositive1726398 - 172684716900.1
carbonate dehydrataseAKN88_RS08260Not AvailablePositive1726944 - 172758224168.0
hypothetical proteinAKN88_RS08265Not AvailablePositive1727683 - 172799711535.0
2-oxo acid dehydrogenase subunit e2AKN88_RS08270Not AvailableNegative1728056 - 172937247518.1
alpha-ketoacid dehydrogenase subunit betaAKN88_RS08275Not AvailableNegative1729415 - 173039235682.7
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaAKN88_RS08280Not AvailableNegative1730392 - 173157344241.4
yaeq family proteinAKN88_RS08285Not AvailablePositive1731807 - 173234319781.8
single-stranded-dna-specific exonuclease recjAKN88_RS08290Not AvailablePositive1732350 - 173406562258.3
duf4136 domain-containing proteinAKN88_RS08295Not AvailableNegative1734091 - 173470222611.3

Displaying genes 1701 – 1710 of 2319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.