Thiopseudomonas alkaliphila strain E5571

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Thiopseudomonas

Description

Thiopseudomonas alkaliphila strain E5571 is characterized by a single replicon, which indicates a streamlined genetic organization that may contribute to its adaptability within specific environments. This strain has been cataloged under the accession number NZ_CP012365.1, providing a reference point for genomic studies and comparative analyses with other microorganisms. As a member of the Thiopseudomonas genus, this strain is likely to exhibit metabolic capabilities associated with sulfur and nitrogen cycles, typical of many organisms within this group. These metabolic pathways are significant for the biogeochemical cycling of elements in alkaline environments, where Thiopseudomonas alkaliphila is typically found. The ecological role of Thiopseudomonas alkaliphila strain E5571 can be inferred from its physiological traits, as it may participate in the oxidation of inorganic sulfur compounds, contributing to the maintenance of ecosystem health in alkaline habitats. This process is essential for the detoxification of sulfur compounds and the promotion of nutrient availability in such environments. In summary, the single replicon and the unique accession number of Thiopseudomonas alkaliphila strain E5571 serve as essential identifiers for understanding its ecological and metabolic roles, particularly in alkaline ecosystems where it may play a vital role in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusThiopseudomonas
SpeciesThiopseudomonas alkaliphila
Strainstrain E5571

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiopseudomonas alkaliphila strain E5571


Gene Summary

Adenine Count

633280 bp

Thymine Count

629959 bp

Guanine Count

566539 bp

Cytosine Count

562930 bp

Genome Length

2397029 bp

Protein-coding Genes

2211 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is200/is605 family transposaseAKN88_RS06815Not AvailableNegative1425124 - 142565119646.2
uroporphyrinogen decarboxylaseAKN88_RS06820Not AvailablePositive1425936 - 142700639200.1
lysr family transcriptional regulatorAKN88_RS06825Not AvailableNegative1427088 - 142798432804.7
class iii extradiol ring-cleavage dioxygenaseAKN88_RS06830Not AvailablePositive1428091 - 142891830475.3
duf2218 domain-containing proteinAKN88_RS11955Not AvailablePositive1428946 - 142923310869.1
cytochrome bAKN88_RS11960Not AvailablePositive1429245 - 142978420018.0
yccs family putative transporterAKN88_RS06845Not AvailableNegative1429835 - 143203682144.3
30s ribosomal protein s12 methylthiotransferase accessory factor ycaoAKN88_RS06850Not AvailablePositive1432259 - 143401965580.2
helix-turn-helix domain-containing proteinAKN88_RS06855Not AvailableNegative1434106 - 143488529319.1
bile acid:sodium symporter family proteinAKN88_RS06860Not AvailablePositive1434998 - 143597535247.6

Displaying genes 1411 – 1420 of 2319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.