Thiopseudomonas alkaliphila strain E5571

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Thiopseudomonas

Description

Thiopseudomonas alkaliphila strain E5571 is characterized by a single replicon, which indicates a streamlined genetic organization that may contribute to its adaptability within specific environments. This strain has been cataloged under the accession number NZ_CP012365.1, providing a reference point for genomic studies and comparative analyses with other microorganisms. As a member of the Thiopseudomonas genus, this strain is likely to exhibit metabolic capabilities associated with sulfur and nitrogen cycles, typical of many organisms within this group. These metabolic pathways are significant for the biogeochemical cycling of elements in alkaline environments, where Thiopseudomonas alkaliphila is typically found. The ecological role of Thiopseudomonas alkaliphila strain E5571 can be inferred from its physiological traits, as it may participate in the oxidation of inorganic sulfur compounds, contributing to the maintenance of ecosystem health in alkaline habitats. This process is essential for the detoxification of sulfur compounds and the promotion of nutrient availability in such environments. In summary, the single replicon and the unique accession number of Thiopseudomonas alkaliphila strain E5571 serve as essential identifiers for understanding its ecological and metabolic roles, particularly in alkaline ecosystems where it may play a vital role in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusThiopseudomonas
SpeciesThiopseudomonas alkaliphila
Strainstrain E5571

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiopseudomonas alkaliphila strain E5571


Gene Summary

Adenine Count

633280 bp

Thymine Count

629959 bp

Guanine Count

566539 bp

Cytosine Count

562930 bp

Genome Length

2397029 bp

Protein-coding Genes

2211 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-siderophore abc transporter substrate-binding proteinAKN88_RS05315Not AvailableNegative1107884 - 110881633335.1
ligand-gated channel proteinAKN88_RS05320Not AvailablePositive1109140 - 111112273321.3
lysr family transcriptional regulatorAKN88_RS05325Not AvailableNegative1111190 - 111209833452.6
d-amino acid dehydrogenaseAKN88_RS05330Not AvailablePositive1112364 - 111362345988.1
rid family detoxifying hydrolaseAKN88_RS05335Not AvailablePositive1113650 - 111403613682.6
alanine racemaseAKN88_RS05340Not AvailablePositive1114046 - 111513138802.8
aspartate aminotransferase family proteinAKN88_RS05345Not AvailablePositive1115494 - 111677446445.8
coa-acylating methylmalonate-semialdehyde dehydrogenaseAKN88_RS05350Not AvailablePositive1116817 - 111830753600.8
hypothetical proteinAKN88_RS11810Not AvailableNegative1118332 - 11184995796.92
trap transporter large permeaseAKN88_RS05355Not AvailableNegative1119248 - 112055546029.9

Displaying genes 1111 – 1120 of 2319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.