Thiopseudomonas alkaliphila strain E5571

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Thiopseudomonas

Description

Thiopseudomonas alkaliphila strain E5571 is characterized by a single replicon, which indicates a streamlined genetic organization that may contribute to its adaptability within specific environments. This strain has been cataloged under the accession number NZ_CP012365.1, providing a reference point for genomic studies and comparative analyses with other microorganisms. As a member of the Thiopseudomonas genus, this strain is likely to exhibit metabolic capabilities associated with sulfur and nitrogen cycles, typical of many organisms within this group. These metabolic pathways are significant for the biogeochemical cycling of elements in alkaline environments, where Thiopseudomonas alkaliphila is typically found. The ecological role of Thiopseudomonas alkaliphila strain E5571 can be inferred from its physiological traits, as it may participate in the oxidation of inorganic sulfur compounds, contributing to the maintenance of ecosystem health in alkaline habitats. This process is essential for the detoxification of sulfur compounds and the promotion of nutrient availability in such environments. In summary, the single replicon and the unique accession number of Thiopseudomonas alkaliphila strain E5571 serve as essential identifiers for understanding its ecological and metabolic roles, particularly in alkaline ecosystems where it may play a vital role in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusThiopseudomonas
SpeciesThiopseudomonas alkaliphila
Strainstrain E5571

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiopseudomonas alkaliphila strain E5571 chromosome.

Gene Summary

Adenine Count

633280 bp

Thymine Count

629959 bp

Guanine Count

566539 bp

Cytosine Count

562930 bp

Genome Length

2397029 bp

Protein-coding Genes

2211 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucyl/phenylalanyl-trna--protein transferaseAKN88_RS11105Not AvailableNegative2321470 - 232218326260.2
dna translocase ftsk 4tm domain-containing proteinAKN88_RS12065Not AvailablePositive2322349 - 2325312107480.0
outer membrane lipoprotein chaperone lolaAKN88_RS11115Not AvailablePositive2325347 - 232599723995.1
replication-associated recombination protein aAKN88_RS11120Not AvailablePositive2326037 - 232735948725.9
fluoride efflux transporter crcbAKN88_RS11125Not AvailablePositive2327359 - 232774213487.8
serine--trna ligaseAKN88_RS11130Not AvailablePositive2327754 - 232904047380.4
murein l,d-transpeptidase catalytic domain family proteinAKN88_RS11135Not AvailableNegative2329124 - 232984926409.2
murein l,d-transpeptidaseAKN88_RS11140Not AvailablePositive2330073 - 233177663601.4
threonine--trna ligaseAKN88_RS11145Not AvailablePositive2332008 - 233393073320.4
translation initiation factor if-3AKN88_RS11150Not AvailablePositive2333930 - 233448120971.5

Displaying genes 2271 – 2280 of 2319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.