Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Thiopseudomonas |
| Species | Thiopseudomonas alkaliphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiopseudomonas alkaliphila strain E5571
Accession NumberNZ_CP012365.1
Gene Summary
Adenine Count
633280 bp
Thymine Count
629959 bp
Guanine Count
566539 bp
Cytosine Count
562930 bp
Genome Length
2397029 bp
Protein-coding Genes
2211 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is200/is605 family transposase | AKN88_RS06815 | Not Available | - | 1425124 - 1425651 | 19646.2 |
| uroporphyrinogen decarboxylase | AKN88_RS06820 | Not Available | + | 1425936 - 1427006 | 39200.1 |
| lysr family transcriptional regulator | AKN88_RS06825 | Not Available | - | 1427088 - 1427984 | 32804.7 |
| class iii extradiol ring-cleavage dioxygenase | AKN88_RS06830 | Not Available | + | 1428091 - 1428918 | 30475.3 |
| duf2218 domain-containing protein | AKN88_RS11955 | Not Available | + | 1428946 - 1429233 | 10869.1 |
| cytochrome b | AKN88_RS11960 | Not Available | + | 1429245 - 1429784 | 20018.0 |
| yccs family putative transporter | AKN88_RS06845 | Not Available | - | 1429835 - 1432036 | 82144.3 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | AKN88_RS06850 | Not Available | + | 1432259 - 1434019 | 65580.2 |
| helix-turn-helix domain-containing protein | AKN88_RS06855 | Not Available | - | 1434106 - 1434885 | 29319.1 |
| bile acid:sodium symporter family protein | AKN88_RS06860 | Not Available | + | 1434998 - 1435975 | 35247.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.