Corynebacterium riegelii strain PUDD_83A45

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium riegelii strain PUDD_83A45 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. This strain is cataloged under the accession number NZ_CP012342.1, which provides a unique identifier for its genomic sequence in biological databases. Corynebacterium riegelii is part of the larger genus Corynebacterium, known for its diverse roles in various environments, including soil and human-associated habitats. Strain PUDD_83A45 may possess specific adaptations that allow it to thrive in particular niches, although detailed metabolic or ecological functions are not specified in the provided data. The presence of a single replicon can suggest a stable genome and potentially efficient replication processes, which may confer advantages in various ecological contexts. Understanding the genomic characteristics of strains like PUDD_83A45 may contribute to insights into the ecological roles of Corynebacterium species, particularly their interactions within microbial communities and their potential applications in biotechnology or medicine. Given the importance of Corynebacterium species in various environments, the genomic analysis of specific strains like PUDD_83A45 can help elucidate their ecological significance and potential utility in research and industry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium riegelii
Strainstrain PUDD_83A45

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium riegelii strain PUDD_83A45
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium riegelii strain PUDD_83A45 chromosome.

Gene Summary

Adenine Count

504708 bp

Thymine Count

506086 bp

Guanine Count

775192 bp

Cytosine Count

775755 bp

Genome Length

2563723 bp

Protein-coding Genes

2359 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
resuscitation-promoting factor rpf1 domain-containing proteinAK829_RS06280Not AvailablePositive1285768 - 128640321548.8
hypothetical proteinAK829_RS06285Not AvailableNegative1286495 - 12866926827.01
helicase-associated domain-containing proteinAK829_RS06290Not AvailablePositive1286745 - 128876371200.6
fad-binding and (fe-s)-binding domain-containing proteinAK829_RS06295Not AvailableNegative1288760 - 1291576100844.0
abc transporter atp-binding proteinAK829_RS06300Not AvailablePositive1291633 - 129251131719.1
abc transporter permeaseAK829_RS06305Not AvailablePositive1292511 - 129371942951.4
dna repair helicase xpbAK829_RS06310Not AvailablePositive1293794 - 129543460615.5
duf3239 domain-containing proteinAK829_RS06315Not AvailablePositive1295461 - 129611423620.8
mfs transporterAK829_RS06320Not AvailableNegative1296107 - 129723439480.0
short-chain fatty acid transporterAK829_RS06325Not AvailableNegative1297249 - 129860749072.8

Displaying genes 1311 – 1320 of 2448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.