Octadecabacter temperatus strain SB1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Octadecabacter

Description

Octadecabacter temperatus strain SB1 is a notable bacterium characterized by its two replicons, which are notable for their contribution to the organism's genetics and adaptability. The strain has been sequenced, with its genetic information accessible through the accession numbers NZ_CP012160.1 and NZ_CP012161.1. The presence of two replicons may indicate a complex regulatory system that allows for enhanced metabolic versatility and resilience in varying environmental conditions. This trait can be particularly advantageous for survival in diverse habitats, suggesting that Octadecabacter temperatus strain SB1 may play a significant role in its ecological niche. In summary, the genetic structure of Octadecabacter temperatus strain SB1, as evidenced by its two replicons, supports its potential adaptability and ecological significance. This adaptability may enable the bacterium to thrive in various environments, contributing to its ecological interactions and roles in microbial communities.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Alphaproteobacteria
Order	Rhodobacterales
Family	Roseobacteraceae
Genus	Octadecabacter
Species	Octadecabacter temperatus
Strain	strain SB1

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Octadecabacter temperatus strain SB1 plasmid OSB_p1, complete

NZ_CP012161.1 NZ_CP012160.1

Gene Summary

Adenine Count

7519 bp

Thymine Count

7890 bp

Guanine Count

8119 bp

Cytosine Count

8032 bp

Genome Length

31560 bp

Protein-coding Genes

26 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
lysozyme inhibitor lpri family protein	OSB_RS12505	Not Available	Negative	2490329 - 2490697	13859.9
nad(p)h-dependent oxidoreductase	OSB_RS12510	Not Available	Negative	2491004 - 2491756	28071.9
deor/glpr family dna-binding transcription regulator	OSB_RS12515	Not Available	Positive	2491913 - 2492707	27827.3
n-acetylglucosamine kinase	OSB_RS12520	Not Available	Positive	2492700 - 2493608	31275.9
sis domain-containing protein	OSB_RS12525	Not Available	Positive	2493629 - 2494582	32736.4
class ii d-tagatose-bisphosphate aldolase, non-catalytic subunit	OSB_RS12530	Not Available	Positive	2494579 - 2495865	45313.9
abc transporter atp-binding protein	OSB_RS12535	Not Available	Positive	2495869 - 2496918	37953.8
helix-turn-helix domain-containing protein	OSB_RS12540	Not Available	Negative	2496915 - 2497778	32373.8
sugar abc transporter substrate-binding protein	OSB_RS12545	Not Available	Positive	2497969 - 2499219	45190.6
carbohydrate abc transporter permease	OSB_RS12550	Not Available	Positive	2499253 - 2500173	34190.4

Displaying genes 2541 – 2550 of 3298 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.