Xanthomonas phaseoli pv. phaseoli strain ISO98C12

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas phaseoli pv. phaseoli strain ISO98C12 is a rod-shaped bacterium known for its significance in plant pathology, notably affecting common bean crops. The strain possesses flagella, indicating its motility, which can play a role in its pathogenicity and interaction with host plants. This bacterium has two replicons, which suggests a complex genomic structure that may contribute to its adaptability and survival in various environments. The presence of two replicons can also facilitate the regulation of gene expression and contribute to the bacterium's pathogenic mechanisms. The strain is cataloged under two accessions: NZ_CP012057.1 and NZ_CP012059.1, which provide genetic sequences that can be useful for further research and study. This genetic information is crucial for understanding the strain's virulence factors, resistance mechanisms, and potential methods for disease control. From an ecological perspective, Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plays a significant role in the dynamics of agricultural ecosystems, particularly in regions where common beans are cultivated. Its pathogenicity can lead to significant crop losses, making it a key target for agricultural management practices aimed at disease prevention and control. Understanding this bacterium's traits and genetic makeup is essential for developing effective strategies to mitigate its impact on bean production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas phaseoli
Strainpv. phaseoli strain ISO98C12

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas phaseoli pv. phaseoli strain ISO98C12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap47,

Gene Summary

Adenine Count

9371 bp

Thymine Count

8999 bp

Guanine Count

14094 bp

Cytosine Count

14139 bp

Genome Length

46603 bp

Protein-coding Genes

47 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s41 family peptidaseAC611_RS22340Not AvailablePositive4862415 - 486390253659.1
manganese efflux pump mntp family proteinAC611_RS22345Not AvailablePositive4864156 - 486474019831.7
pas domain-containing hybrid sensor histidine kinase/response regulatorAC611_RS22350Not AvailableNegative4864906 - 4868358126618.0
glycosyl hydrolase 115 family proteinAC611_RS22360Not AvailablePositive4869043 - 487168596441.9
gh36-type glycosyl hydrolase domain-containing proteinAC611_RS22365Not AvailableNegative4871779 - 487417889160.2
mfs transporterAC611_RS22370Not AvailableNegative4874181 - 487556350299.1
gluconokinaseAC611_RS22375Not AvailablePositive4875720 - 487630420458.5
pqq-binding-like beta-propeller repeat proteinAC611_RS22385Not AvailablePositive4877130 - 487886061158.8
hypothetical proteinAC611_RS22390Not AvailableNegative4879183 - 48794108292.81
type ii 3-dehydroquinate dehydrataseAC611_RS22395Not AvailableNegative4879391 - 487984015972.5

Displaying genes 4301 – 4310 of 4594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.