Xanthomonas phaseoli pv. phaseoli strain ISO98C12

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas phaseoli pv. phaseoli strain ISO98C12 is a rod-shaped bacterium known for its significance in plant pathology, notably affecting common bean crops. The strain possesses flagella, indicating its motility, which can play a role in its pathogenicity and interaction with host plants. This bacterium has two replicons, which suggests a complex genomic structure that may contribute to its adaptability and survival in various environments. The presence of two replicons can also facilitate the regulation of gene expression and contribute to the bacterium's pathogenic mechanisms. The strain is cataloged under two accessions: NZ_CP012057.1 and NZ_CP012059.1, which provide genetic sequences that can be useful for further research and study. This genetic information is crucial for understanding the strain's virulence factors, resistance mechanisms, and potential methods for disease control. From an ecological perspective, Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plays a significant role in the dynamics of agricultural ecosystems, particularly in regions where common beans are cultivated. Its pathogenicity can lead to significant crop losses, making it a key target for agricultural management practices aimed at disease prevention and control. Understanding this bacterium's traits and genetic makeup is essential for developing effective strategies to mitigate its impact on bean production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas phaseoli
Strainpv. phaseoli strain ISO98C12

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas phaseoli pv. phaseoli strain ISO98C12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap47,

Gene Summary

Adenine Count

9371 bp

Thymine Count

8999 bp

Guanine Count

14094 bp

Cytosine Count

14139 bp

Genome Length

46603 bp

Protein-coding Genes

47 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna glutamyl-q(34) synthetase gluqrsAC611_RS13180Not AvailablePositive2879213 - 288011232605.9
beta-ketoacyl-acp reductaseAC611_RS13185Not AvailablePositive2880197 - 288093726635.7
polyhydroxyalkanoate synthesis repressor pharAC611_RS13190Not AvailablePositive2881097 - 288167221153.1
Ncrna_class:otherNot AvailableNot AvailablePositive2881727 - 2881801Not Available
trab/gumn family proteinAC611_RS13200Not AvailableNegative2881855 - 288282935715.8
duf1684 domain-containing proteinAC611_RS13205Not AvailableNegative2882863 - 288379833712.3
dna mismatch repair endonuclease mutlAC611_RS13210Not AvailableNegative2883798 - 288567567746.4
n-acetylmuramoyl-l-alanine amidaseAC611_RS13215Not AvailableNegative2885812 - 288751557188.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeAC611_RS13220Not AvailableNegative2887586 - 288808617726.1
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseAC611_RS13225Not AvailableNegative2888083 - 288957050449.5

Displaying genes 2611 – 2620 of 4594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.