Xanthomonas phaseoli pv. phaseoli strain ISO98C12

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas phaseoli pv. phaseoli strain ISO98C12 is a rod-shaped bacterium known for its significance in plant pathology, notably affecting common bean crops. The strain possesses flagella, indicating its motility, which can play a role in its pathogenicity and interaction with host plants. This bacterium has two replicons, which suggests a complex genomic structure that may contribute to its adaptability and survival in various environments. The presence of two replicons can also facilitate the regulation of gene expression and contribute to the bacterium's pathogenic mechanisms. The strain is cataloged under two accessions: NZ_CP012057.1 and NZ_CP012059.1, which provide genetic sequences that can be useful for further research and study. This genetic information is crucial for understanding the strain's virulence factors, resistance mechanisms, and potential methods for disease control. From an ecological perspective, Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plays a significant role in the dynamics of agricultural ecosystems, particularly in regions where common beans are cultivated. Its pathogenicity can lead to significant crop losses, making it a key target for agricultural management practices aimed at disease prevention and control. Understanding this bacterium's traits and genetic makeup is essential for developing effective strategies to mitigate its impact on bean production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas phaseoli
Strainpv. phaseoli strain ISO98C12

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas phaseoli pv. phaseoli strain ISO98C12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap47,

Gene Summary

Adenine Count

9371 bp

Thymine Count

8999 bp

Guanine Count

14094 bp

Cytosine Count

14139 bp

Genome Length

46603 bp

Protein-coding Genes

47 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homoserine o-acetyltransferase metxAC611_RS12810Not AvailablePositive2801637 - 280283942983.0
mfs transporterAC611_RS12815Not AvailablePositive2802990 - 280360422504.4
thiol reductant abc exporter subunit cydcAC611_RS12820Not AvailableNegative2803678 - 280536359093.1
thiol reductant abc exporter subunit cyddAC611_RS12825Not AvailableNegative2805360 - 280709661409.4
cytochrome ubiquinol oxidase subunit iAC611_RS12830Not AvailablePositive2807248 - 280888560476.2
cytochrome d ubiquinol oxidase subunit iiAC611_RS12835Not AvailablePositive2808902 - 281005340510.4
cytochrome bd-i oxidase subunit cydxAC611_RS12840Not AvailablePositive2810142 - 28102524109.94
Trna-proNot AvailableNot AvailablePositive2810312 - 2810388Not Available
cynx/nimt family mfs transporterAC611_RS12850Not AvailablePositive2810472 - 281173743698.7
coce/nond family hydrolaseAC611_RS12855Not AvailableNegative2811718 - 281364371118.2

Displaying genes 2541 – 2550 of 4594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.