Xanthomonas citri pv. fuscans strain ISO118C1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. fuscans strain ISO118C1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This strain is associated with significant plant diseases, including canker, citrus canker, and black spot, affecting various hosts such as Mangifera indica (mango), Citrus, and Citrus x paradisi (grapefruit). The bacterium typically inhabits fruit surfaces and leaf surfaces, making these areas critical for its survival and spread. Notably, X. citri pv. fuscans strain ISO118C1 has a single replicon, which is relevant for its genetic stability and potential pathogenic behavior. Understanding the ecological niche of X. citri pv. fuscans is essential, as its presence on host surfaces can lead to substantial agricultural impacts, particularly in regions where mango and citrus cultivation is prominent. The disease manifestations associated with this strain can severely affect fruit quality and yield, leading to economic losses. Therefore, monitoring and managing this pathogen is crucial for maintaining healthy crops in affected areas.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. fuscans strain ISO118C1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. fuscans strain ISO118C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfruit surfaces; leaf surface; leaf surfaces
Biotic relationshipNot Available
Host(s)Mangifera indica, Citrus, Citrus x paradisi
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. fuscans strain ISO118C1 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamine--fructose-6-phosphate transaminase (isomerizing)AC613_RS19890Not AvailableNegative4426012 - 442784165819.0
efflux rnd transporter periplasmic adaptor subunitAC613_RS19895Not AvailablePositive4428047 - 442931845210.7
abc transporter atp-binding proteinAC613_RS19900Not AvailablePositive4429367 - 443008626190.4
abc transporter permeaseAC613_RS19905Not AvailablePositive4430098 - 443139948050.1
abc transporter permeaseAC613_RS19910Not AvailablePositive4431455 - 443268144505.8
nuclear transport factor 2 family proteinAC613_RS19915Not AvailablePositive4432730 - 443321517941.3
sigma-54-dependent transcriptional regulatorAC613_RS19920Not AvailablePositive4433251 - 443459448586.9
sensor histidine kinaseAC613_RS19925Not AvailablePositive4434603 - 443594950457.0
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuAC613_RS19930Not AvailableNegative4436052 - 443742248178.7
gtra family proteinAC613_RS19935Not AvailablePositive4437567 - 443795014019.5

Displaying genes 3831 – 3840 of 4604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Citrus cankerCausesPMC8042644
CankerCausesPMC8042644
Black spotCausesPMC8042644
Citrus bacterial cankerCausesPMC3407170
Citrus cankerCausesPMC9009655
Citrus canker aCausesPMC9009655

Displaying health effects 1 – 6 of 6 in total