Xanthomonas citri pv. fuscans strain ISO118C1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. fuscans strain ISO118C1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This strain is associated with significant plant diseases, including canker, citrus canker, and black spot, affecting various hosts such as Mangifera indica (mango), Citrus, and Citrus x paradisi (grapefruit). The bacterium typically inhabits fruit surfaces and leaf surfaces, making these areas critical for its survival and spread. Notably, X. citri pv. fuscans strain ISO118C1 has a single replicon, which is relevant for its genetic stability and potential pathogenic behavior. Understanding the ecological niche of X. citri pv. fuscans is essential, as its presence on host surfaces can lead to substantial agricultural impacts, particularly in regions where mango and citrus cultivation is prominent. The disease manifestations associated with this strain can severely affect fruit quality and yield, leading to economic losses. Therefore, monitoring and managing this pathogen is crucial for maintaining healthy crops in affected areas.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. fuscans strain ISO118C1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. fuscans strain ISO118C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfruit surfaces; leaf surface; leaf surfaces
Biotic relationshipNot Available
Host(s)Mangifera indica, Citrus, Citrus x paradisi
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. fuscans strain ISO118C1 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaaAC613_RS15100Not AvailablePositive3346372 - 334833073506.9
poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgabAC613_RS15105Not AvailablePositive3348312 - 335021070788.9
poly-beta-1,6-n-acetyl-d-glucosamine synthaseAC613_RS15110Not AvailablePositive3350214 - 335146747750.8
poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgadAC613_RS15115Not AvailablePositive3351464 - 335191016726.5
Trna-argNot AvailableNot AvailablePositive3352280 - 3352356Not Available
aldehyde dehydrogenase family proteinAC613_RS15125Not AvailablePositive3352495 - 335402754033.7
duf4190 domain-containing proteinAC613_RS15130Not AvailablePositive3354608 - 33548929827.49
class i sam-dependent methyltransferaseAC613_RS15135Not AvailablePositive3354895 - 335566228307.4
quinone-dependent dihydroorotate dehydrogenaseAC613_RS15140Not AvailablePositive3355668 - 335672337556.4
udp-n-acetylmuramate dehydrogenaseAC613_RS15145Not AvailablePositive3356720 - 335777237643.0

Displaying genes 2911 – 2920 of 4604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Citrus cankerCausesPMC8042644
CankerCausesPMC8042644
Black spotCausesPMC8042644
Citrus bacterial cankerCausesPMC3407170
Citrus cankerCausesPMC9009655
Citrus canker aCausesPMC9009655

Displaying health effects 1 – 6 of 6 in total