Xanthomonas citri pv. fuscans strain ISO118C1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. fuscans strain ISO118C1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This strain is associated with significant plant diseases, including canker, citrus canker, and black spot, affecting various hosts such as Mangifera indica (mango), Citrus, and Citrus x paradisi (grapefruit). The bacterium typically inhabits fruit surfaces and leaf surfaces, making these areas critical for its survival and spread. Notably, X. citri pv. fuscans strain ISO118C1 has a single replicon, which is relevant for its genetic stability and potential pathogenic behavior. Understanding the ecological niche of X. citri pv. fuscans is essential, as its presence on host surfaces can lead to substantial agricultural impacts, particularly in regions where mango and citrus cultivation is prominent. The disease manifestations associated with this strain can severely affect fruit quality and yield, leading to economic losses. Therefore, monitoring and managing this pathogen is crucial for maintaining healthy crops in affected areas.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. fuscans strain ISO118C1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. fuscans strain ISO118C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfruit surfaces; leaf surface; leaf surfaces
Biotic relationshipNot Available
Host(s)Mangifera indica, Citrus, Citrus x paradisi
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. fuscans strain ISO118C1 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2272 domain-containing proteinAC613_RS09980Not AvailableNegative2199982 - 220103437247.2
carboxylating nicotinate-nucleotide diphosphorylaseAC613_RS09985Not AvailableNegative2201097 - 220198431453.8
trm112 family proteinAC613_RS09990Not AvailableNegative2201981 - 22022509610.59
5-(carboxyamino)imidazole ribonucleotide mutaseAC613_RS09995Not AvailablePositive2202309 - 220281217098.7
5-(carboxyamino)imidazole ribonucleotide synthaseAC613_RS10000Not AvailablePositive2202809 - 220395440107.8
superoxide dismutaseAC613_RS10005Not AvailableNegative2204095 - 220467321510.4
grx4 family monothiol glutaredoxinAC613_RS10010Not AvailablePositive2204795 - 220511511943.5
sdr family nad(p)-dependent oxidoreductaseAC613_RS10015Not AvailablePositive2205112 - 220585525533.4
yhgn family naat transporterAC613_RS10020Not AvailablePositive2205852 - 220645121615.9
tonb-dependent receptorAC613_RS10030Not AvailablePositive2207077 - 2210301117390.0

Displaying genes 1961 – 1970 of 4604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Citrus cankerCausesPMC8042644
CankerCausesPMC8042644
Black spotCausesPMC8042644
Citrus bacterial cankerCausesPMC3407170
Citrus cankerCausesPMC9009655
Citrus canker aCausesPMC9009655

Displaying health effects 1 – 6 of 6 in total