Xanthomonas citri pv. fuscans strain ISO118C1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. fuscans strain ISO118C1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This strain is associated with significant plant diseases, including canker, citrus canker, and black spot, affecting various hosts such as Mangifera indica (mango), Citrus, and Citrus x paradisi (grapefruit). The bacterium typically inhabits fruit surfaces and leaf surfaces, making these areas critical for its survival and spread. Notably, X. citri pv. fuscans strain ISO118C1 has a single replicon, which is relevant for its genetic stability and potential pathogenic behavior. Understanding the ecological niche of X. citri pv. fuscans is essential, as its presence on host surfaces can lead to substantial agricultural impacts, particularly in regions where mango and citrus cultivation is prominent. The disease manifestations associated with this strain can severely affect fruit quality and yield, leading to economic losses. Therefore, monitoring and managing this pathogen is crucial for maintaining healthy crops in affected areas.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. fuscans strain ISO118C1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. fuscans strain ISO118C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfruit surfaces; leaf surface; leaf surfaces
Biotic relationshipNot Available
Host(s)Mangifera indica, Citrus, Citrus x paradisi
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. fuscans strain ISO118C1 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dmp19 family proteinAC613_RS00450Not AvailablePositive98592 - 9923624259.9
gdsl-type esterase/lipase family proteinAC613_RS00455Not AvailableNegative99466 - 10057840238.9
rpib/laca/lacb family sugar-phosphate isomeraseAC613_RS00460Not AvailableNegative101127 - 10178323417.9
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudAC613_RS00465Not AvailableNegative101947 - 10270226132.2
5-dehydro-4-deoxy-d-glucuronate isomeraseAC613_RS00470Not AvailableNegative102891 - 10374531221.9
laci family dna-binding transcriptional regulatorAC613_RS00485Not AvailableNegative104716 - 10577438379.1
family 43 glycosylhydrolaseAC613_RS00490Not AvailableNegative105920 - 10750358296.6
trap transporter large permeaseAC613_RS00495Not AvailableNegative107699 - 10898244523.6
trap transporter small permeaseAC613_RS00500Not AvailableNegative108982 - 10950318745.5
trap transporter substrate-binding proteinAC613_RS00505Not AvailableNegative109514 - 11051236985.3

Displaying genes 131 – 140 of 4604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Citrus cankerCausesPMC8042644
CankerCausesPMC8042644
Black spotCausesPMC8042644
Citrus bacterial cankerCausesPMC3407170
Citrus cankerCausesPMC9009655
Citrus canker aCausesPMC9009655

Displaying health effects 1 – 6 of 6 in total