Bacillus smithii strain DSM 4216

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus smithii strain DSM 4216 is characterized by possessing two replicons, which are essential for its genetic stability and adaptability. The strain is cataloged under the accession numbers NZ_CP012025.1 and NZ_CP012024.1, reflecting its genetic sequences stored in biological databases. The presence of two replicons in Bacillus smithii strain DSM 4216 may confer advantages in terms of gene expression regulation and metabolic versatility, allowing the organism to thrive in various environments. Bacillus species are known for their resilience and ability to form spores, which enable them to withstand unfavorable conditions. This trait is particularly important in ecological contexts, as it allows for survival and persistence in diverse habitats. In summary, Bacillus smithii strain DSM 4216, with its two replicons and specific genetic identifiers, exemplifies the adaptability and robustness typical of the Bacillus genus, contributing to its ecological role in various ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus smithii
Strainstrain DSM 4216

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Bacillus smithii strain DSM 4216
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangethermophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacillus smithii strain DSM 4216 chromosome 1, complete sequence.

Gene Summary

Adenine Count

994087 bp

Thymine Count

1001158 bp

Guanine Count

685659 bp

Cytosine Count

687874 bp

Genome Length

3368778 bp

Protein-coding Genes

3020 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gapa-binding peptide sr1pBSM4216_RS05820Not AvailablePositive1227085 - 12272014271.89
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeBSM4216_RS05825Q81MS2Negative1227870 - 122933953666.9
nitronate monooxygenase family proteinBSM4216_RS05830Q9I4V0Positive1229488 - 123044734508.7
upf0223 family proteinBSM4216_RS05835C5D846Positive1230481 - 123076211127.2
yktb family proteinBSM4216_RS05840A8FCS9Negative1231059 - 123170924930.9
hypothetical proteinBSM4216_RS05845Not AvailablePositive1231863 - 12320577613.4
ph domain-containing proteinBSM4216_RS05850Not AvailablePositive1232440 - 123288916823.2
inositol monophosphatase family proteinBSM4216_RS05855Q45499Positive1233462 - 123425629700.7
ylaf family proteinBSM4216_RS05860O07630Negative1234312 - 12344976783.77
translational gtpase typaBSM4216_RS05865O07631Positive1234652 - 123649369053.0

Displaying genes 1161 – 1170 of 3166 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

174 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00004573,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneC19H24O4Chemical structure of 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneNot available
Average316.3915Da
Monoisotopic316.1674593Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 174 metabolites

Health Effects

No health effects information available for this bacterium.