Haloferax gibbonsii strain ARA6

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloferax

Description

Haloferax gibbonsii strain ARA6 is a Gram-negative, rod-shaped archaeon characterized by the presence of flagella, which facilitate motility. This strain is notable for its genomic structure, possessing five distinct replicons, indicating a complex genomic architecture that may contribute to its adaptability in various environments. The presence of multiple replicons can be indicative of the organism's ability to maintain genetic diversity and respond to environmental stresses, which is a common trait among extremophiles. The accession numbers associated with Haloferax gibbonsii strain ARA6—NZ_CP011951.1, NZ_CP011950.1, NZ_CP011949.1, NZ_CP011948.1, and NZ_CP011947.1—provide resources for further genomic analysis and exploration of its genetic features. Understanding the traits of Haloferax gibbonsii strain ARA6, particularly its Gram-negative status and rod shape, allows researchers to categorize its biological functions and ecological niche. The motility conferred by flagella may play a significant role in its survival strategies within extreme environments, such as high-salinity habitats. Overall, the study of this archaeon enhances our comprehension of microbial diversity and the evolutionary adaptations that enable life in extreme conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloferax
SpeciesHaloferax gibbonsii
Strainstrain ARA6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Haloferax gibbonsii strain ARA6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloferax gibbonsii strain ARA6 plasmid pHG3, complete sequence.

Gene Summary

Adenine Count

26457 bp

Thymine Count

27137 bp

Guanine Count

30142 bp

Cytosine Count

29919 bp

Genome Length

113655 bp

Protein-coding Genes

81 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfo/idh/moca family proteinABY42_RS15915Not AvailablePositive211423 - 21252039681.2
l-rhamnose mutarotaseABY42_RS15920Not AvailableNegative213062 - 21336411526.3
l-rhamnono-1,4-lactonaseABY42_RS15925Not AvailablePositive213444 - 21431332832.9
2-keto-3-deoxy-l-rhamnonate dehydrogenaseABY42_RS15930Not AvailablePositive214497 - 21553136811.9
l-rhamnonate dehydrataseABY42_RS15935Not AvailablePositive215717 - 21692244302.2
tigr03560 family f420-dependent llm class oxidoreductaseABY42_RS15940Not AvailablePositive216925 - 21795338717.9
iclr family transcriptional regulatorABY42_RS15945Not AvailablePositive218172 - 21893028492.9
2,4-diketo-3-deoxy-l-rhamnonate hydrolaseABY42_RS15950Not AvailablePositive219015 - 21986630322.9
l-rhamnose 1-dehydrogenaseABY42_RS15955Not AvailablePositive219918 - 22071527991.7
rod-determining factor rdfaABY42_RS15960Not AvailablePositive221561 - 22218423194.0

Displaying genes 611 – 620 of 3928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.