Marinobacter sp. CP1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter sp. CP1 is a notable member of the genus Marinobacter, which is characterized by its halophilic nature and ability to thrive in marine environments. One of the defining features of Marinobacter sp. CP1 is the presence of flagella, which suggests that this organism has the capability for motility. This trait is significant as it may enhance the bacterium's ability to navigate through its habitat, potentially aiding in nutrient acquisition and interaction with other microorganisms. The genome of Marinobacter sp. CP1 contains a single replicon, which is indicative of its genetic organization and replication strategy. This trait can influence various aspects of the organism's biology, including its growth rate and adaptability to environmental changes. The accession number for Marinobacter sp. CP1 is NZ_CP011929.1, providing a reference point for further genomic studies and comparisons within the Marinobacter genus and related species. In terms of ecological significance, Marinobacter sp. CP1’s motility and adaptation to marine conditions suggest a role in nutrient cycling within marine ecosystems. Its ability to move towards nutrient-rich areas may facilitate its participation in biogeochemical processes, such as the degradation of organic matter. Understanding the traits of Marinobacter sp. CP1 can contribute to a broader comprehension of microbial dynamics in oceanic environments, highlighting the importance of such microorganisms in maintaining the health and balance of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter sp. CP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter sp. CP1 chromosome, complete genome.

Gene Summary

Adenine Count

1023421 bp

Thymine Count

1030606 bp

Guanine Count

1361590 bp

Cytosine Count

1352805 bp

Genome Length

4768422 bp

Protein-coding Genes

4358 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
wadjet anti-phage system protein jetd domain-containing proteinACP86_RS20475Not AvailableNegative4436818 - 443797243194.7
atp-binding proteinACP86_RS20480Not AvailableNegative4437956 - 4441279124754.0
duf4194 domain-containing proteinACP86_RS20485Not AvailableNegative4441276 - 444201927726.3
duf3375 domain-containing proteinACP86_RS20490Not AvailableNegative4442026 - 444352256749.1
is1182 family transposaseACP86_RS20495Not AvailableNegative4443919 - 444527750079.9
hypothetical proteinACP86_RS20500Not AvailablePositive4445332 - 444586820019.9
ribose-phosphate pyrophosphokinaseACP86_RS20505Not AvailableNegative4445933 - 444691635681.3
nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing proteinACP86_RS20510Not AvailablePositive4447129 - 444884461959.9
formate dehydrogenase subunit alphaACP86_RS20515Not AvailablePositive4448855 - 4451725102724.0
dna repair exonucleaseACP86_RS20520Not AvailablePositive4451841 - 445296241147.2

Displaying genes 4131 – 4140 of 4422 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

37 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00007183-maleylpyruvateC7H4O6Chemical structure of 3-maleylpyruvateNot available
Average184.104Da
Monoisotopic184.001885009Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002113L-threitolC4H10O4Chemical structure of L-threitolNot available
Average122.1198Da
Monoisotopic122.0579088Da

Displaying 1–10 of 37 metabolites

Health Effects

No health effects information available for this bacterium.