Eubacterium limosum strain SA11

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Eubacteriaceae

Genus

Eubacterium

Description

Eubacterium limosum strain SA11 is a Gram-positive, anaerobic rod-shaped bacterium primarily found in the rumen of hosts, including Homo sapiens. This organism is characterized by the presence of flagella, which may facilitate its movement within the anaerobic environment of the rumen. Eubacterium limosum strain SA11 has a single replicon, indicating a simple genomic structure that is typical for many bacteria. Importantly, this strain is nonsporulating, which suggests that it does not form spores as a means of survival under adverse conditions. One notable health effect associated with Eubacterium limosum strain SA11 is its potential role in bacteremia, a condition characterized by the presence of bacteria in the bloodstream. This association highlights the need for further investigation into the pathogenicity of this strain and its implications for human health. The presence of Eubacterium limosum strain SA11 in the rumen suggests that it may play a role in the complex microbial ecosystem of this habitat, contributing to the fermentation processes that are critical for the digestion of fibrous plant material. The interactions between this bacterium and other microbial inhabitants of the rumen could be significant for understanding both normal digestive health and the potential for dysbiosis leading to health complications such as bacteremia.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyEubacteriaceae
GenusEubacterium
SpeciesEubacterium limosum
Strainstrain SA11

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Eubacterium limosum strain SA11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium limosum strain SA11 chromosome, complete genome.

Gene Summary

Adenine Count

1090366 bp

Thymine Count

1091408 bp

Guanine Count

982375 bp

Cytosine Count

986183 bp

Genome Length

4150332 bp

Protein-coding Genes

3793 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1538 domain-containing proteinACH52_RS14900Not AvailableNegative3198119 - 319888327599.1
duf1538 domain-containing proteinACH52_RS14905Not AvailableNegative3198880 - 319957224520.3
ribosomal protection-like abc-f family proteinACH52_RS14910Not AvailablePositive3199740 - 320167773838.7
hypothetical proteinACH52_RS14915Not AvailablePositive3201766 - 32019968435.15
arsenic metallochaperone arsd family proteinACH52_RS14920Not AvailableNegative3202047 - 320233410759.9
glu/leu/phe/val dehydrogenaseACH52_RS14925Not AvailableNegative3202544 - 320379445858.8
hypothetical proteinACH52_RS14930Not AvailableNegative3203956 - 320487032411.4
sensor histidine kinaseACH52_RS14935Not AvailableNegative3205018 - 320703075149.4
hypothetical proteinACH52_RS14940Not AvailablePositive3207069 - 320879360754.5
response regulator transcription factorACH52_RS14945Not AvailableNegative3208818 - 320950726067.0

Displaying genes 3021 – 3030 of 3924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

265 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00021245-dehydro-4-deoxy-D-glucarateC6H6O7Chemical structure of 5-dehydro-4-deoxy-D-glucarateNot available
Average190.1076Da
Monoisotopic190.0113525Da

Displaying 1–10 of 265 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC11107343

Displaying health effects 1 – 1 of 1 in total