Archangium gephyra strain DSM 2261

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Archangiaceae

Genus

Archangium

Description

Archangium gephyra strain DSM 2261 is a notable bacterium characterized by its possession of two replicons. This trait is significant as it can influence the organism's genetic stability and adaptability. The strain has been associated with hosts from the Equidae family, indicating a potential ecological niche and interaction with equine species. The strain's genomic data can be accessed through specific accession numbers, NZ_CP011509.1 and QUMU00000000.1. These accession numbers provide a reference for researchers interested in the genetic makeup and functional capabilities of Archangium gephyra, facilitating further studies on its role within its host environment. Understanding the relationship between Archangium gephyra and Equidae may shed light on its ecological role, particularly in the context of microbial communities associated with horses. Such interactions could be significant for the health and microbiome dynamics of equine species, potentially impacting digestion, immunity, or disease resistance. The two-replicon structure may further suggest a complex regulatory mechanism that allows the bacterium to thrive in conjunction with its host, emphasizing the intricate associations between microorganisms and their animal hosts.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyArchangiaceae
GenusArchangium
SpeciesArchangium gephyra
Strainstrain DSM 2261

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatKiritimati
Biotic relationshipNot Available
Host(s)Equidae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Archangium gephyra strain DSM 2261


Gene Summary

Adenine Count

1916800 bp

Thymine Count

1898875 bp

Guanine Count

4349215 bp

Cytosine Count

4324542 bp

Genome Length

12489432 bp

Protein-coding Genes

9898 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAA314_RS00045Not AvailablePositive12841 - 130447261.47
type ii toxin-antitoxin system vapc family toxinAA314_RS00050Not AvailableNegative13058 - 1354918742.6
aaa family atpaseAA314_RS52265Not AvailableNegative13530 - 1481048010.1
voc family proteinAA314_RS00060Not AvailablePositive15541 - 1595114802.4
glycoside hydrolase family 3 n-terminal domain-containing proteinAA314_RS00065Not AvailablePositive16053 - 1715939518.7
hypothetical proteinAA314_RS00070Not AvailablePositive17215 - 1803930769.8
duf3396 domain-containing proteinAA314_RS00075Not AvailablePositive18123 - 1897432677.7
sigma-54-dependent fis family transcriptional regulatorAA314_RS00080Q43965Negative18978 - 2060659893.4
hypothetical proteinAA314_RS00085Not AvailablePositive20749 - 2119516891.2
hypothetical proteinAA314_RS00090Not AvailablePositive21225 - 2168917539.1

Displaying genes 11 – 20 of 19851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

426 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000338(1R,4R,5R)-5-hydroxycamphorC10H16O2Chemical structure of (1R,4R,5R)-5-hydroxycamphorNot available
Average168.2328Da
Monoisotopic168.115029756Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 426 metabolites

Health Effects

No health effects information available for this bacterium.