Helicobacter pylori strain PNG84A

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PNG84A is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. It is found predominantly in a host-associated habitat and exhibits a singular cell arrangement. PNG84A possesses flagella, contributing to its mobility, although it is classified as non-motile in practical terms. This strain thrives optimally at 37°C, fitting within the mesophilic temperature range. The bacterium has a free-living biotic relationship and is known to inhabit various hosts, including Homo sapiens, Gallus gallus, other aves, primates, and various mammals and rodents. Its pathogenicity is particularly significant in humans, where it is associated with numerous health conditions, including chronic gastric inflammation, gastric cancer, and peptic ulcer disease. Specifically, PNG84A is implicated in the development of gastric ulcers, adenocarcinoma, and mucosa-associated lymphoid tissue (MALT) lymphoma, among other gastrointestinal diseases. This strain's ability to cause chronic gastritis and other gastric complications underscores its role in human health and disease. The presence of H. pylori in diverse hosts suggests a complex ecological relationship, indicating that its pathogenic mechanisms might be influenced by host factors and environmental conditions. Understanding these interactions can provide insights into the epidemiology of H. pylori-related diseases and the development of potential therapeutic strategies.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PNG84A

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PNG84A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PNG84A chromosome, complete genome.

Gene Summary

Adenine Count

468433 bp

Thymine Count

469123 bp

Guanine Count

295106 bp

Cytosine Count

298788 bp

Genome Length

1531450 bp

Protein-coding Genes

1458 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidylserine decarboxylaseAA974_RS06140Not AvailableNegative1257088 - 125789130102.3
duf6115 domain-containing proteinAA974_RS06145Not AvailableNegative1257885 - 125839119788.0
hypothetical proteinAA974_RS06150Not AvailableNegative1258404 - 125889819012.3
menaquinone biosynthesis prenyltransferase mqnpAA974_RS06155Not AvailableNegative1258891 - 125973331259.2
comec/rec2 family competence proteinAA974_RS06160Not AvailableNegative1259804 - 126111750405.3
replicative dna helicaseAA974_RS06165Not AvailableNegative1261114 - 126258055761.9
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseAA974_RS06170Not AvailableNegative1262592 - 126398650355.5
copper-sensing histidine kinase crdsAA974_RS06175Not AvailableNegative1263989 - 126520346801.7
copper response regulator transcription factor crdrAA974_RS06180Not AvailableNegative1265169 - 126581024859.1
hypothetical proteinAA974_RS06185Not AvailableNegative1265900 - 126714546500.4

Displaying genes 1231 – 1240 of 1500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total