Helicobacter pylori strain PNG84A

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain PNG84A is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. It is found predominantly in a host-associated habitat and exhibits a singular cell arrangement. PNG84A possesses flagella, contributing to its mobility, although it is classified as non-motile in practical terms. This strain thrives optimally at 37°C, fitting within the mesophilic temperature range. The bacterium has a free-living biotic relationship and is known to inhabit various hosts, including Homo sapiens, Gallus gallus, other aves, primates, and various mammals and rodents. Its pathogenicity is particularly significant in humans, where it is associated with numerous health conditions, including chronic gastric inflammation, gastric cancer, and peptic ulcer disease. Specifically, PNG84A is implicated in the development of gastric ulcers, adenocarcinoma, and mucosa-associated lymphoid tissue (MALT) lymphoma, among other gastrointestinal diseases. This strain's ability to cause chronic gastritis and other gastric complications underscores its role in human health and disease. The presence of H. pylori in diverse hosts suggests a complex ecological relationship, indicating that its pathogenic mechanisms might be influenced by host factors and environmental conditions. Understanding these interactions can provide insights into the epidemiology of H. pylori-related diseases and the development of potential therapeutic strategies.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain PNG84A

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain PNG84A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PNG84A chromosome, complete genome.

Gene Summary

Adenine Count

468433 bp

Thymine Count

469123 bp

Guanine Count

295106 bp

Cytosine Count

298788 bp

Genome Length

1531450 bp

Protein-coding Genes

1458 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hop family adhesin hopqAA974_RS05200Not AvailableNegative1085920 - 108783369085.6
purine-nucleoside phosphorylaseAA974_RS05205Not AvailableNegative1088096 - 108880025845.5
phosphopentomutaseAA974_RS05210Not AvailableNegative1088797 - 109003846136.2
nupc/nupg family nucleoside cnt transporterAA974_RS05215Not AvailableNegative1090050 - 109130643768.1
Trna-metNot AvailableNot AvailablePositive1091412 - 1091489Not Available
mfs transporterAA974_RS05225Not AvailablePositive1091674 - 109296647354.2
trna 2-thiocytidine biosynthesis ttca family proteinAA974_RS05230Not AvailablePositive1092985 - 109374628539.3
cation:proton antiporterAA974_RS05235Not AvailableNegative1093755 - 109490643352.7
hp1184 family multidrug efflux mate transporterAA974_RS05240Not AvailableNegative1094932 - 109629050541.2
sugar transporterAA974_RS05245Not AvailableNegative1096476 - 109765143113.9

Displaying genes 1041 – 1050 of 1500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total