Helicobacter pylori strain DU15

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain DU15 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella, which contributes to its motility in host-associated environments. This strain is mesophilic, thriving optimally at 37°C, and is notable for its single replicon and two-membrane structure. H. pylori strain DU15 has a diverse range of hosts, including Homo sapiens, Gallus gallus, various Aves, Primates, Mammalia, Amoeba, Rodentia, and Cricetinae, indicating its adaptability and potential for transmission across different species. The bacterium is known for its pathogenicity in humans, where it is implicated in a variety of gastrointestinal diseases. These include chronic gastric inflammation, gastric ulcers, and gastric cancers, such as adenocarcinoma and MALT lymphoma. The strain can also lead to conditions like GERD, functional dyspepsia, and peptic ulcer disease, reflecting its significant impact on human health. The presence of H. pylori strain DU15 in the gastrointestinal tract of various hosts suggests a complex biotic relationship, where it can exist free-living but also establish detrimental interactions with its hosts. Its ability to cause chronic conditions, including atrophic gastritis and intestinal metaplasia, underscores the importance of understanding this bacterium in the context of human health and disease. The ecological implications of H. pylori strain DU15 extend beyond individual health, as its widespread presence among various host species may influence microbial community dynamics and host-pathogen interactions within different environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain DU15

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain DU15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain DU15 chromosome, complete genome.

Gene Summary

Adenine Count

494132 bp

Thymine Count

496006 bp

Guanine Count

311763 bp

Cytosine Count

312510 bp

Genome Length

1614411 bp

Protein-coding Genes

1529 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEE66_RS03310Not AvailablePositive663417 - 66378213296.6
endonuclease muts2EE66_RS03315Not AvailablePositive663801 - 66606285857.4
inorganic diphosphataseEE66_RS03320Not AvailableNegative666207 - 66672819270.0
site-specific dna-methyltransferaseEE66_RS03325Not AvailableNegative666784 - 66740724151.1
glycosyltransferase family 25 proteinEE66_RS03330Not AvailableNegative667362 - 66795823460.2
glycosyltransferase family 25 proteinEE66_RS03335Not AvailableNegative668011 - 66900939230.3
adenylate kinaseEE66_RS03340Not AvailableNegative669034 - 66960921506.9
aspartate--trna ligaseEE66_RS03345Not AvailableNegative669626 - 67135965345.2
chemotaxis proteinEE66_RS03350Not AvailableNegative671394 - 67233535613.1
nad-dependent dna ligase ligaEE66_RS03355Not AvailablePositive672413 - 67438674226.5

Displaying genes 651 – 660 of 1571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total