Helicobacter pylori strain DU15

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain DU15 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella, which contributes to its motility in host-associated environments. This strain is mesophilic, thriving optimally at 37°C, and is notable for its single replicon and two-membrane structure. H. pylori strain DU15 has a diverse range of hosts, including Homo sapiens, Gallus gallus, various Aves, Primates, Mammalia, Amoeba, Rodentia, and Cricetinae, indicating its adaptability and potential for transmission across different species. The bacterium is known for its pathogenicity in humans, where it is implicated in a variety of gastrointestinal diseases. These include chronic gastric inflammation, gastric ulcers, and gastric cancers, such as adenocarcinoma and MALT lymphoma. The strain can also lead to conditions like GERD, functional dyspepsia, and peptic ulcer disease, reflecting its significant impact on human health. The presence of H. pylori strain DU15 in the gastrointestinal tract of various hosts suggests a complex biotic relationship, where it can exist free-living but also establish detrimental interactions with its hosts. Its ability to cause chronic conditions, including atrophic gastritis and intestinal metaplasia, underscores the importance of understanding this bacterium in the context of human health and disease. The ecological implications of H. pylori strain DU15 extend beyond individual health, as its widespread presence among various host species may influence microbial community dynamics and host-pathogen interactions within different environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain DU15

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain DU15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain DU15 chromosome, complete genome.

Gene Summary

Adenine Count

494132 bp

Thymine Count

496006 bp

Guanine Count

311763 bp

Cytosine Count

312510 bp

Genome Length

1614411 bp

Protein-coding Genes

1529 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isoleucine--trna ligaseEE66_RS06550Not AvailableNegative1334482 - 1337244105990.0
rna-binding s4 domain-containing proteinEE66_RS06555Not AvailableNegative1337277 - 13375349500.75
hypothetical proteinEE66_RS06560Not AvailablePositive1337636 - 133825623419.6
site-specific dna-methyltransferaseEE66_RS08795Not AvailableNegative1338651 - 13387704872.24
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnEE66_RS06570Not AvailableNegative1338944 - 134001740709.0
kpsf/gutq family sugar-phosphate isomeraseEE66_RS06575Not AvailableNegative1340014 - 134100335900.3
ribonuclease jEE66_RS06580Not AvailableNegative1340987 - 134307177854.0
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaEE66_RS06585Not AvailableNegative1343105 - 134392030506.6
nickel-binding protein hpnlEE66_RS06590Not AvailablePositive1344174 - 13444079428.28
hypothetical proteinEE66_RS08210Not AvailablePositive1344620 - 13448207622.46

Displaying genes 1301 – 1310 of 1571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total